Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g00387 ATGTACGAGGAAACTACCTACGAGTCCGATTTGGCTCTTTTGGATTCCATTCGCCGCCACTTACTCGGGGAATCCGAGGATATCAAATTCGGAGCCCCGATTGCTAACTCTGGTAGCACTCCTCTTTACTCTCGGAGCTCCAGTTTCAGTAGGCTGTACCCGTGTTTGAGTAACGATTGGGGTGAACTTCCTCTTAAGGAAGATGATTCAGAGGACATGCTGCTCTACGGTGTTCTTCGCGATGCCATCAACGTAGGGTGGGTCCCATCTCTAGACGCAGGTTCACCGGACAGTTTCTCGTCGGGTTTCGTCCCGGAAGTAACCGTGAAACCCGAACCTGATGTTTTTCCGGCACCGGAACCTGTTTTCGTTCCTCCGGTGGTTCAGAAGGATGCACCGTCGGTTGTTCCGGCGAAGGGGAAACACTACCGCGGCGTGAGGCAGCGGCCGTGGGGAAAATTCGCGGCGGAGATCCGCGACCCGGCTAAACACGGGGCTCGGGTTTGGCTCGGAACGTTTGAGACGGCTGAGGACGCCGCGCTGGCATACGATCGAGCCGCTTATCGAATGCGCGGCTCGCGGGCTTTGTTGAATTTCCCGCTTCGGATTAATTCGGGCGAGCCCGAACCGGTTAGGGTGACGTCGAAGCGAGCGTCGCCGGAGCCGTCATCTTCGTCAGAGAGTGGATCGTCGGGTAAGCGGCGGAAGAAAGTGGTGGGGTCGACTGTGACGGCTCCAAGTGGGTTGAGAACGGGGCAAGTGGGAAGTCAAGTGGCTCAGTGCACACGTGCGGAACAGTTGTTGGTTAACTAA 813 0.567 MYEETTYESDLALLDSIRRHLLGESEDIKFGAPIANSGSTPLYSRSSSFSRLYPCLSNDWGELPLKEDDSEDMLLYGVLRDAINVGWVPSLDAGSPDSFSSGFVPEVTVKPEPDVFPAPEPVFVPPVVQKDAPSVVPAKGKHYRGVRQRPWGKFAAEIRDPAKHGARVWLGTFETAEDAALAYDRAAYRMRGSRALLNFPLRINSGEPEPVRVTSKRASPEPSSSSESGSSGKRRKKVVGSTVTAPSGLRTGQVGSQVAQCTRAEQLLVN* 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g00387 270 Gene3D AP2/ERF domain 141 203 IPR036955 GO:0003700|GO:0006355
Lapu2g00387 270 PRINTS Ethylene responsive element binding protein signature 166 182 IPR001471 GO:0003700|GO:0006355
Lapu2g00387 270 PRINTS Ethylene responsive element binding protein signature 143 154 IPR001471 GO:0003700|GO:0006355
Lapu2g00387 270 FunFam Ethylene-responsive transcription factor 2 141 201 - -
Lapu2g00387 270 PANTHER DNA-BINDING DOMAIN 134 232 IPR044808 GO:0003700|GO:0009873
Lapu2g00387 270 MobiDBLite consensus disorder prediction 207 256 - -
Lapu2g00387 270 CDD AP2 141 200 IPR001471 GO:0003700|GO:0006355
Lapu2g00387 270 ProSiteProfiles AP2/ERF domain profile. 142 200 IPR001471 GO:0003700|GO:0006355
Lapu2g00387 270 SMART rav1_2 142 206 IPR001471 GO:0003700|GO:0006355
Lapu2g00387 270 Pfam AP2 domain 142 192 IPR001471 GO:0003700|GO:0006355
Lapu2g00387 270 SUPERFAMILY DNA-binding domain 142 202 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g00387 Lapu-Chr2 3191733 3193082 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g00387 8 269 AP2-EREBP Transcription Factor Family AT4G17500 56.934 2.67e-86 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lapu2g00387 AP2 3.1e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g00387 K09286 - gmx:100819649 359.377