Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g00374 ATGGCAACACCCAAGAATGATGAAACAGCCAAGAAAACTAACAACAGAGGAGCGTGGACCGCGGAGGAAGATCAGAAGCTAGCCCAGTGCATTGAAATTCATGGTGCAAAGAGGTGGAAAACTGTTGCAATTAAATCAGGTCTAAACAGGTGCGGAAAAAGTTGCAGGTTGAGATGGTTAAACTATCTGAGACCCAACATCAAGAGGGGCAACATATCAGTTGAAGAAGAGGATTTGATTATTAGGCTTCACAGATTGCTGGGAAACAGGTGGTCATTGATAGCTAAGAGACTTCCAGGACGAACAGACAATGAAATTAAGAACTACTGGAATACTTGTTTGTGCAAAAAAGTTAATCATCACAAAAAGGTGAAACCAGAAACTTCAATGGCACAACCAACACATTCGACTCAGAATACTGAGGAAAAAGTTGCAGTAGAGAATAAAGAAGGCACTGATGATGGGAGTGGGGACTCAGAGATTAACTTTGATGTCAACGAATTCTTCAACTTCTCCATTGAAGGACCCTATGCATTCGATTGGGTGATCTAG 552 0.4167 MATPKNDETAKKTNNRGAWTAEEDQKLAQCIEIHGAKRWKTVAIKSGLNRCGKSCRLRWLNYLRPNIKRGNISVEEEDLIIRLHRLLGNRWSLIAKRLPGRTDNEIKNYWNTCLCKKVNHHKKVKPETSMAQPTHSTQNTEEKVAVENKEGTDDGSGDSEINFDVNEFFNFSIEGPYAFDWVI* 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g00374 183 ProSiteProfiles Myb-like domain profile. 64 114 IPR001005 -
Lapu2g00374 183 MobiDBLite consensus disorder prediction 124 159 - -
Lapu2g00374 183 MobiDBLite consensus disorder prediction 142 156 - -
Lapu2g00374 183 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 64 118 IPR017930 -
Lapu2g00374 183 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 11 63 IPR017930 -
Lapu2g00374 183 ProSiteProfiles Myb-like domain profile. 11 63 IPR001005 -
Lapu2g00374 183 FunFam Transcription factor TT2 72 144 - -
Lapu2g00374 183 SUPERFAMILY Homeodomain-like 15 110 IPR009057 -
Lapu2g00374 183 CDD SANT 73 112 IPR001005 -
Lapu2g00374 183 Gene3D - 8 69 - -
Lapu2g00374 183 SMART sant 68 116 IPR001005 -
Lapu2g00374 183 SMART sant 15 65 IPR001005 -
Lapu2g00374 183 CDD SANT 18 63 IPR001005 -
Lapu2g00374 183 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 8 145 - -
Lapu2g00374 183 FunFam MYB-related transcription factor 15 68 - -
Lapu2g00374 183 Pfam Myb-like DNA-binding domain 16 63 IPR001005 -
Lapu2g00374 183 Pfam Myb-like DNA-binding domain 69 113 IPR001005 -
Lapu2g00374 183 Gene3D - 72 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g00374 Lapu-Chr2 3086624 3087435 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g00374 16 165 MYB Transcription Factor Family AT3G13540 51.534 1.73e-49 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lapu2g00374 Myb_DNA-binding 4.1e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g00374 K09422 - gmx:100816449 351.288