Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g00367 ATGGTGAAGATAACTTTTGGTAGCTTTGATGACTCTTTTAGCGCTGCCTCTCTAAAGGCCTATTTTGCAGAGCTTCATGCTACTCTCATTTTCGTCTTCGCTGGTGTTGGATCAGCCATTGCTTACAACGAGCTCACAAAAGATGCTGCATTGGATCCAACGGGGCTGGTGGCAGTAGCAGTGGCACATGCATTCGCACTGTTTGTAGGAGTGTCTGTGGCAGCCAACATCTCAGGTGGCCATTTGAACCCAGCTGTCACATTTGGATTGGCTGTCGGAGGCAACATCACCATCTTAACTGGTTTCTTGTACTGGATTGCCCAATTGTTGGGTTCTATCCTTGCATGTCTCCTCCTCAACTTGGTCACCGCCAAGAGCATTCCAACCCATGGACTGGCTTATGGTGTGAACGGTTTCCAAGGTGTGGTGTGTGAGATTATCATCACCTTTGCGTTGGTTTACACAGTGTATGCAACTGCAGCTGACCCTAAAAAGGGGTCATTGGGTACCATTGCACCCATTGCTATTGGGTTCATTGTGGGTGCCAACATCCTGGCTGCTGGCCCATTCAGTGGTGGTTCCATGAACCCAGCTCGCTCATTCGGCCCAGCTGTGGTCAGTGGAAACTTTGCTGATAACTGGATCTACTGGGTTGGCCCATTGATTGGAGGAGGTTTGGCTGGGTTCATTTATGGAGATGTCTTCATTGGTTCCTATGCCCCTGTCCCAGCCTCATGA 738 0.4959 MVKITFGSFDDSFSAASLKAYFAELHATLIFVFAGVGSAIAYNELTKDAALDPTGLVAVAVAHAFALFVGVSVAANISGGHLNPAVTFGLAVGGNITILTGFLYWIAQLLGSILACLLLNLVTAKSIPTHGLAYGVNGFQGVVCEIIITFALVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVSGNFADNWIYWVGPLIGGGLAGFIYGDVFIGSYAPVPAS* 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g00367 245 PRINTS Major intrinsic protein family signature 19 38 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lapu2g00367 245 PRINTS Major intrinsic protein family signature 63 87 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lapu2g00367 245 PRINTS Major intrinsic protein family signature 177 199 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lapu2g00367 245 PRINTS Major intrinsic protein family signature 100 119 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lapu2g00367 245 PRINTS Major intrinsic protein family signature 144 162 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lapu2g00367 245 PRINTS Major intrinsic protein family signature 214 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lapu2g00367 245 Pfam Major intrinsic protein 14 231 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lapu2g00367 245 Gene3D Glycerol uptake facilitator protein. 2 239 IPR023271 -
Lapu2g00367 245 PANTHER AQUAPORIN-8 4 237 IPR034294 -
Lapu2g00367 245 SUPERFAMILY Aquaporin-like 16 236 IPR023271 -
Lapu2g00367 245 ProSitePatterns MIP family signature. 81 89 IPR022357 -
Lapu2g00367 245 NCBIfam MIP family channel protein 23 231 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lapu2g00367 245 FunFam Probable aquaporin TIP1-1 2 245 - -
Lapu2g00367 245 CDD MIP 19 231 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g00367 Lapu-Chr2 3036430 3038649 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g00367 1 243 Major Intrinsic Protein MIP AT5G47450 77.459 4.94e-132 371
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g00367 K09873 - gmx:100527338 424.476