Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g00353 ATGGCTTCTCTCTTACTGTCACTGCAAGTGGTGCTCACGGTTTTCACCTGCTTATTCCATGCAACAACAGTGACGGCTACACCCCACCACGTCCGTACCTTCCAGACATTCTCTTCCGCCAACTCCTCCAACAACCACCACTGGGTCGGACCCATCGGTCACCGTAAAATAACGGTTGACATTAACGGCGGTTCCCACTACCGGTCCGTTCAAGACGCCGTCAATGCCGTCCCAGACAACAACAGAAGGAATATCCTCATTCAAATCAACGCCGGATGCTACAAAGAAAAGGTGGTGGTGCCCGTGACGAAGCCGTACATAACGTTTCAGGGCGCTGGTAAAGAAGTGACGGTGATAGAATGGCATGATCGAGCCAGTGACCCTGGTCCCAGTGGACAGCAACTGCGTACTTACAGAACCGCTTCAGTTACTGTTTTTGCCAGCTATTTTTCTGCCAGAAACATCAGCTTCAAGAACACAGCGCCAGCACCAATGCCGGGGATGCAGGGATGGCAAGCGGTGGCGTTTCGCATATCCGGCGATAAGGCATACTTCTCCGGCTGCGGCTTCTACGGCGCACAGGACACACTTTGTGACGATGCTGGCAGACATTACTTCAAGGAATGCTACATTGAGGGATCGATAGATTTCATTTTTGGCAATGGCAGGTCCATGTATAAGGATTGCTGGCTACACTCAATAGCAACGAGGTTTGGGTCGATAGCAGCCCACGACAGGGAACAGGAGGAAGAGAAGACAGGGTTTTCATTCGTAGGATGCAGGGTGACAGGTACAGGTCCACTGTATGTGGGACGAGCAATGGGACAGTACTCCAGAATCGTCTACTCCTACACATATTTTGATGACATTGTTGCACATGGTGGTTGGGATGATTGGGACCATGCCGACAATAAGAACAAGACTGTGTTCTTCGGAGTGTACCAGTGTTGGGGACCAGGAGCAGAGGCAGTACGTGGGGTCTCACTGGCCCGAGACTTAGATTTCGAAACGGCTCATCCATTTATCAGGAAGAGTTTCGTCAATGGCAGACACTGGATTGCGCCATCCGATGCTTAG 1077 0.5125 MASLLLSLQVVLTVFTCLFHATTVTATPHHVRTFQTFSSANSSNNHHWVGPIGHRKITVDINGGSHYRSVQDAVNAVPDNNRRNILIQINAGCYKEKVVVPVTKPYITFQGAGKEVTVIEWHDRASDPGPSGQQLRTYRTASVTVFASYFSARNISFKNTAPAPMPGMQGWQAVAFRISGDKAYFSGCGFYGAQDTLCDDAGRHYFKECYIEGSIDFIFGNGRSMYKDCWLHSIATRFGSIAAHDREQEEEKTGFSFVGCRVTGTGPLYVGRAMGQYSRIVYSYTYFDDIVAHGGWDDWDHADNKNKTVFFGVYQCWGPGAEAVRGVSLARDLDFETAHPFIRKSFVNGRHWIAPSDA* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g00353 358 FunFam Pectinesterase 53 355 - -
Lapu2g00353 358 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 47 354 - -
Lapu2g00353 358 ProSitePatterns Pectinesterase signature 2. 211 220 IPR033131 -
Lapu2g00353 358 Pfam Pectinesterase 57 349 IPR000070 GO:0030599|GO:0042545
Lapu2g00353 358 Gene3D - 53 357 IPR012334 -
Lapu2g00353 358 SUPERFAMILY Pectin lyase-like 55 355 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g00353 Lapu-Chr2 2928100 2930779 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g00353 1 358 Carbohydrate Esterase AT5G47500 72.099 0.0 541
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g00353 - - gmx:100816190 673.7