Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g00331 ATGGCAAGCAGAGTAAGAGTTGTTGTTTCACTGCTTCTCATGAAGCTTGTGATTTACATGAGCGCCACCGCACAAGGTTCAATAACCCAACACACAGACCCTAACCCTGCAGAGTTCGTGAAGTCGTCGTGCAGGGCCACACGGTACCCTGTTTTATGCGTCCACTCGTTGTTGGCCTACGCAAGTGTCATTCACCGAAGTGACCGGCAACTTGCGATGACAGCTTTGTCGGTGAGCATATCGAGGACCCGATCCTCGGCAACGTTCGTGAAGAAGATGTCGAAAGCAAGAGGCGTGAAGGGTAGGGAGTGGAGAGCGGTGCAAGATTGCGTGGAGACCATTGGTGATAGCGTGGAGCGTCTGAAGCAATCGGTGAGGGAGTTGGGGCGAACGGGAGTGGGAGAAGGCTTCGCATGGCACATGAGCAATGTCCAGACATGGGTTAGCGCTGCCCTCACCGACGACAACACTTGTCTCGACGGCTTCGCTGGTTCGGCCATGAATGGAAACGTGAAGAGTGGTATAAAGGAGAGGGTTGTCCACGTTGCTCAAGTCACCAGCAATGCTCTCGCCTTGGTTAATCGCTTTGCCTCCACCCACCATACTCAATCTCCTTAA 618 0.534 MASRVRVVVSLLLMKLVIYMSATAQGSITQHTDPNPAEFVKSSCRATRYPVLCVHSLLAYASVIHRSDRQLAMTALSVSISRTRSSATFVKKMSKARGVKGREWRAVQDCVETIGDSVERLKQSVRELGRTGVGEGFAWHMSNVQTWVSAALTDDNTCLDGFAGSAMNGNVKSGIKERVVHVAQVTSNALALVNRFASTHHTQSP* 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g00331 205 SMART PMEI_2 35 192 IPR006501 GO:0004857
Lapu2g00331 205 NCBIfam pectinesterase inhibitor domain 8 194 IPR006501 GO:0004857
Lapu2g00331 205 Gene3D Invertase/pectin methylesterase inhibitor family protein 36 196 IPR035513 -
Lapu2g00331 205 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 38 196 IPR035513 -
Lapu2g00331 205 PANTHER PECTINESTERASE INHIBITOR-LIKE 11 192 - -
Lapu2g00331 205 Pfam Plant invertase/pectin methylesterase inhibitor 39 192 IPR006501 GO:0004857
Lapu2g00331 205 FunFam Pectin methylesterase inhibitor 1 35 196 - -
Lapu2g00331 205 CDD PMEI-like_3 42 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g00331 Lapu-Chr2 2725157 2726151 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g00331 34 199 Carbohydrate Esterase AT3G14310 29.940 2.11e-23 95.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g00331 - - gmx:100776636 286.574