Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g00327 ATGAAAGTTCGTCGCCTTCTTTCTCTGTTTCTTCTGATTTCGTTTCTCATTCCTCCTATGGTTGTTGGAACTGCGGAGCTTAGAGCTCTGATGGAGTTGAAGTCCTCTCTGGACCCAGATGGCAAGATCCTAGCCTCGTGGATCAGTGACGGTGACCCATGCAGTGGCTTGTTCGAAGGGGTTGCGTGCAACCAGAACCAGAAAGTGGTCAACATCTCCTTGCAGGGAAAGGGTCTTTCGGGTTGGCTATCTCCAGCGCTGGCTGAACTCAAATGCTTGTCAGGTTTATACTTGCATTATAACAACCTTTCTGGTGAGATACCCCCACACATTTCAAATCTCACTGATCTGGTTGATCTCTATCTCGACGTGAATAGTTTATCTGGAACTATTCCTCCTTTGCTCGGCAACATGGCTAGTCTCCAAGTGCTGCAGTTGGGGGATAACCAGTTGGTGGGGAATATACCGACACAGATGGGTTCCTTAAAGCAGCTCAGCACTCTTGCTTTGCAATATAACAAGTTAACTGGTCAAATTCCTCTTAGCTTGGGGACGTTAGTGAAGTTAAGAAGGCTAAATTTGAGCTTCAACAACTTTAATGGTACTGTTCCGGCAACACTGGCACATATTGAACATTTGGAAGTTCTAGACATTCAGAACAATTCTTTATCAGGAATTGTTCCTTCGGCATTGAAGAGACTTGGGGAAGGATTCCAAGGTTCAAACAACCCGGGTTTATGTGGAGTTGGGTTTTCTACTTTGAGAGCTTGCAACAAAGATCAGGATTTAAACGTTAACCATATTGATACCTTGGATCGAGATCAACCCAAAAGTCGTAATTCTTCGAAGGCTCTCCCAGAGCCTGCAAATGTTCAGTTGCATTGTGGCCATACCCACTGTTCAAAATCAAGGTTTCCTCAAATTGTGATCACAGCAGGTGTTATAGTCGTTAGTCTTACATTCATATGTGCTGGAATCTTGACATTCTTAAGATACCGCCGTCAAAAGCAGAGGATCAGCAATACATCAAGTTCTTCTTCTCATGGGAAACTCAGTCCTGACCAGCCTAAAGAGTTGTACACAAAAAGTCCTTCTGCACTTGTTAATATTGAGTATTATAGTGGGTGGGATCATTTGTCTAATGGTCAAAATGCTGATGCTGGTGGGTTATTGAATGATTATCTAAGTCAATTTAGGTTTAATGTGGATGAGGTTGAATCTGCAACACAGTATTTCTCGGAAGCCAATTTACTTGGTAAGAGCAAATTCTCGGCAGTTTATAAGGGAGTTCTCAGAGATGGTTCTCTTGTGGCAGTTAGAAGCATCAGCGTAACATGCTGCAAAACCGAGGAAGCTGAATTTGTAAAGGGGTTGAACCTACTAACCTCTCTGAGACATGAAAACCTTGTTAGGCTGAGAGGTTTTTGTTGCTCAAGGAGTAGAGGTGAATGTTTCCTCATCTATGACTTCGCCACCATGGGTAACCTGTCTCAATATCTTGACTTAGAAGATGGAAGTGGCCATGTGCTAGAGTGGTCCAAAAGAGTTTCAATCATCAACGGCATTGCAAAGGGCATTGGATATCTTCATAGCAATGAAGCAAGCAAACCTACAATAGTTCACCAGAATATTTCAGTGGAAAATGTTCTCCTAGACCATCAGTTTAATCCATTGATCATGGATGCTGGACTACCAAAGCTTCTTGCAGATGATGTTGTTTTCTCAGCTCTTAAAGTAAGTGCTGCAATGGGGTACTTGGCTCCCGAATACATTACCACTGGACGATTTACTGAGAAGAGTGACATATACGCATTTGGAGTTATTATTCTTCAAGTTCTATCTGGCAAGACGACTATAGGTAGTTCAATACGGACAGCAGTTGAATCTTTCAGATTTGATGATTCTGTTGACGCAAATCTTAGGGGAAGGTATTCAAAATCTGAAGCAGCCACGCTTTCAAAGCTTGCAATACAGTGTACTCATGAGTTTCCTGACCAAAGACCAACCGTTGTGGATGTGATTCAGGAGTTGAGTGTGTCTTCTGCTCATTTGTAA 2055 0.4268 MKVRRLLSLFLLISFLIPPMVVGTAELRALMELKSSLDPDGKILASWISDGDPCSGLFEGVACNQNQKVVNISLQGKGLSGWLSPALAELKCLSGLYLHYNNLSGEIPPHISNLTDLVDLYLDVNSLSGTIPPLLGNMASLQVLQLGDNQLVGNIPTQMGSLKQLSTLALQYNKLTGQIPLSLGTLVKLRRLNLSFNNFNGTVPATLAHIEHLEVLDIQNNSLSGIVPSALKRLGEGFQGSNNPGLCGVGFSTLRACNKDQDLNVNHIDTLDRDQPKSRNSSKALPEPANVQLHCGHTHCSKSRFPQIVITAGVIVVSLTFICAGILTFLRYRRQKQRISNTSSSSSHGKLSPDQPKELYTKSPSALVNIEYYSGWDHLSNGQNADAGGLLNDYLSQFRFNVDEVESATQYFSEANLLGKSKFSAVYKGVLRDGSLVAVRSISVTCCKTEEAEFVKGLNLLTSLRHENLVRLRGFCCSRSRGECFLIYDFATMGNLSQYLDLEDGSGHVLEWSKRVSIINGIAKGIGYLHSNEASKPTIVHQNISVENVLLDHQFNPLIMDAGLPKLLADDVVFSALKVSAAMGYLAPEYITTGRFTEKSDIYAFGVIILQVLSGKTTIGSSIRTAVESFRFDDSVDANLRGRYSKSEAATLSKLAIQCTHEFPDQRPTVVDVIQELSVSSAHL* 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g00327 684 ProSiteProfiles Protein kinase domain profile. 412 684 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu2g00327 684 Pfam Leucine rich repeat 188 234 IPR001611 GO:0005515
Lapu2g00327 684 Pfam Protein tyrosine and serine/threonine kinase 416 677 IPR001245 GO:0004672|GO:0006468
Lapu2g00327 684 MobiDBLite consensus disorder prediction 340 359 - -
Lapu2g00327 684 SUPERFAMILY L domain-like 26 233 - -
Lapu2g00327 684 Gene3D Ribonuclease Inhibitor 178 244 IPR032675 -
Lapu2g00327 684 Gene3D Transferase(Phosphotransferase) domain 1 493 683 - -
Lapu2g00327 684 SUPERFAMILY Protein kinase-like (PK-like) 394 678 IPR011009 -
Lapu2g00327 684 SMART LRR_typ_2 186 209 IPR003591 -
Lapu2g00327 684 SMART LRR_typ_2 138 162 IPR003591 -
Lapu2g00327 684 SMART LRR_typ_2 90 114 IPR003591 -
Lapu2g00327 684 SMART LRR_typ_2 210 233 IPR003591 -
Lapu2g00327 684 Gene3D Ribonuclease Inhibitor 23 177 IPR032675 -
Lapu2g00327 684 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 141 679 IPR046959 -
Lapu2g00327 684 FunFam Protein NSP-INTERACTING KINASE 2 491 681 - -
Lapu2g00327 684 FunFam Protein NSP-INTERACTING KINASE 2 383 490 - -
Lapu2g00327 684 Gene3D Phosphorylase Kinase; domain 1 383 490 - -
Lapu2g00327 684 Pfam Leucine rich repeat N-terminal domain 26 64 IPR013210 -
Lapu2g00327 684 FunFam Protein NSP-INTERACTING KINASE 2 23 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g00327 Lapu-Chr2 2688774 2692221 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g00327 6 525 Miscellaneous Gene Families AT4G22730 56.604 0.0 568
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Lapu2g00327 PK_Tyr_Ser-Thr 3.2e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g00327 - - gmx:100777169 1203.73