Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g00293 ATGGCCCCCTCACCCTCCTCCAAGAGGCACCCACTCTACCGCGGAATCCGTTCCCGGGGAAGAAAATGGGTCTCCGAAATCCGCGAGCCGCGCAAGGCCTCCCGCATATGGCTCGGCACCTTCCCCTCGCCGGAGATGGCCGCCGCCGCCTATGACGTTGCAGCATTAGCCTTGAAAGGCGACGGCGCTGTTCTCAACCTCCCCCACTCCGTTTCCAAGTATCAACTCCCCGCAACCAACTCTCCTGCGGATATCCGCACTGCTGCCTCCGCTGCAGCTGCAATCATGAAGGCTGAAACTGAAGCTTCCCACAACAATGCATCACAAACTGAAGCTACGCACATTGATGCGTCAACTTGGTGGTTTGAAAATGATTTCCTGGACGAGGAAGCCATTTTCGGCATGCCAAGTTTGCTGGTGGACATGGCTGGAGGAATGCTTCTGTCGCCGCCCAGGATGAGCCCGCCACCGTCCGATAACTCGCCGGAGAAGCAAGCTGCTGAAACTTTGTGGAGTTATTTTTGA 525 0.5695 MAPSPSSKRHPLYRGIRSRGRKWVSEIREPRKASRIWLGTFPSPEMAAAAYDVAALALKGDGAVLNLPHSVSKYQLPATNSPADIRTAASAAAAIMKAETEASHNNASQTEATHIDASTWWFENDFLDEEAIFGMPSLLVDMAGGMLLSPPRMSPPPSDNSPEKQAAETLWSYF* 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g00293 174 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 8 173 IPR045277 GO:0003700
Lapu2g00293 174 Pfam AP2 domain 11 60 IPR001471 GO:0003700|GO:0006355
Lapu2g00293 174 Gene3D AP2/ERF domain 12 70 IPR036955 GO:0003700|GO:0006355
Lapu2g00293 174 MobiDBLite consensus disorder prediction 149 174 - -
Lapu2g00293 174 CDD AP2 11 70 IPR001471 GO:0003700|GO:0006355
Lapu2g00293 174 ProSiteProfiles AP2/ERF domain profile. 12 68 IPR001471 GO:0003700|GO:0006355
Lapu2g00293 174 SUPERFAMILY DNA-binding domain 12 70 IPR016177 GO:0003677
Lapu2g00293 174 SMART rav1_2 12 74 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g00293 Lapu-Chr2 2390040 2390564 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g00293 7 173 AP2-EREBP Transcription Factor Family AT5G52020 51.429 7.51e-45 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lapu2g00293 AP2 3e-09 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g00293 - - gmx:100811020 260.381