Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g00283 ATGGCGACCACAAGGTCCCCGAGCCCTTCCTCTGAGGACATCGTCGATTCGACGCCGTTTCTGGCTAATTCCGGCGGCTCCTCTGACGAGCTCACCACCGGGCGTCGATTTCCGCGGCGGCAGCGGTTACGGCAGGCGGCACGGTTCCTCCGGCAGGCGAGCGGGCGCAGGATGATGCGCGAGCCGTCCATGCTGGTTCGGGAGGCGGCGGCGGAGCAATTGGAGGAGAGGCAGAGCGATTGGGCCTATTCGAAGCCGGTGGTTGTTCTGGACATCGTTTGGAACTTTGCGTTCGTGGTTGTGGCGGGGACCGTGTTGGTTTTGAGCGCGAGCGAAGCGCCGGGGATGCCTCTGAGGTTGTGGATTTTGGGGTACGCTATGCAATGCCTCCTTCACATGGTTTGCGTTTGCGTGGAGTATAGGAGGAGGAGGAGGAACCAACGCGCCACCGCGTCGATTCCGGTGCAGGACAGGGTTGGGAGCAGCAGTGGAAATTTGAGTTCATCTTCGAGGGAGGGTTCAGCTTCTGGTTCTGTGCAGTATGTGTCGTTGGGGCAACTCGACGAGGAGGGTACTAGTGTTGCAAAGCATTTGGAATCAGCCAATACAATGTTTTCATTTGTTTGGTGGATTATTGGATTCTACTGGGTATCAGCTGGTGGTCAAGAATTAGCCCAAGATTCTCCTCAGCTTTACTGGCTATGCATAATCTTCCTGGGTTTTGATGTTTTCTTTGTTGTTTTCTGTGTTGCACTGGCGTGTATCATTGGTATAGCTGTTTGCTGTTGCCTTCCATGTATCATTGCACTTCTATACGCGGTTGCAGACCAGGAAGGAGCATCAAAGGAAGACATTGAGCAGTTGTCAAAATTTAAATTCCGGAGAATTGAAAGCAATGAGAAACTTACAGGAACTGTACAAGGACCTGTTGGAGGAATAATGACCGAATGCCAGGCTGAGTCGCCCATCGAACATGTTCTTGCTGAGGAGGATGCGGAATGTTGCATCTGCCTTTCTTCTTATGACGATGGGGTTGAGTTAAGAGAACTTCCTTGTGGTCACCATTTTCACTGTGTCTGTGTGGATAAATGGCTGTATATTAATGCCACTTGCCCTCTCTGCAAGTATAACATCTTAAAAAGTAGCAACCTCAGTCAAGAGGAAGTGTAG 1170 0.5154 MATTRSPSPSSEDIVDSTPFLANSGGSSDELTTGRRFPRRQRLRQAARFLRQASGRRMMREPSMLVREAAAEQLEERQSDWAYSKPVVVLDIVWNFAFVVVAGTVLVLSASEAPGMPLRLWILGYAMQCLLHMVCVCVEYRRRRRNQRATASIPVQDRVGSSSGNLSSSSREGSASGSVQYVSLGQLDEEGTSVAKHLESANTMFSFVWWIIGFYWVSAGGQELAQDSPQLYWLCIIFLGFDVFFVVFCVALACIIGIAVCCCLPCIIALLYAVADQEGASKEDIEQLSKFKFRRIESNEKLTGTVQGPVGGIMTECQAESPIEHVLAEEDAECCICLSSYDDGVELRELPCGHHFHCVCVDKWLYINATCPLCKYNILKSSNLSQEEV* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g00283 389 MobiDBLite consensus disorder prediction 1 31 - -
Lapu2g00283 389 PANTHER TARGET OF ERK KINASE MPK-1 53 380 - -
Lapu2g00283 389 SMART ring_2 334 374 IPR001841 -
Lapu2g00283 389 MobiDBLite consensus disorder prediction 1 33 - -
Lapu2g00283 389 FunFam E3 ubiquitin-protein ligase At1g12760 320 385 - -
Lapu2g00283 389 MobiDBLite consensus disorder prediction 151 175 - -
Lapu2g00283 389 ProSiteProfiles Zinc finger RING-type profile. 334 375 IPR001841 -
Lapu2g00283 389 SUPERFAMILY RING/U-box 323 381 - -
Lapu2g00283 389 Pfam Ring finger domain 333 375 IPR001841 -
Lapu2g00283 389 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 320 388 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g00283 Lapu-Chr2 2290919 2297035 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g00283 1 382 C3H Transcription Factor Family AT1G68070 48.831 3.96e-118 345
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g00283 - - gmx:100790497 657.521