Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g00271 ATGAAGCCTCGTACTTCGTTGTGGTTTCTCTCTTTGATTTCCGCGCTCTCTTTTGTTGCTTCTAACACTGTGCCCTCAAATGAAGTTTGGGCGCTTAGGAGTTTCAAAGAAGCTGTTTATGAAGACCTATATCAAGTTTTGTCCAATTGGGATACGGTAGAAGCAGATCCTTGTAACTGGTTTGGCGTCACTTGCACTATGCTTCGAGATCATGTCATCAAGCTAAACATATCGGGATCATCATTAAAGGGGTTTCTTGCACCAGAGTTGGGGCAACTCGCCTACTTGCAAGAACTAATTTTGCACGGCAACAATCTCATTGGAACAATACCTAGAGAGTTGGGCGAGTTGAAATATCTCAGGGTGTTTGATCTAGGAATGAATCAGTTAACAGGACCAATTCCTCCAGAGATTGGAAATCTAACTCAAGCTGTGAAAATAAACTTGCAGTCCAACGGGTTGACTGGTAGACTACCTCCAGAGCTTGGAAACTTGAGATTCCTTCAAGATCTTCGGCTGGATAGGAATAGACTTCAAGGACCCGTTCCTGCTGGTGGTAGCTCAAATTTTGCTTCAAATATGCATGGGATGTATGCGTTGAAGGAGAATGTAACTGGCTTGTGTCGTTCGTCTCAGTTGAAAGTAGCAGACTTCTCATATAATTTTTTAGTTGGTAGCATACCCAAATGCTTAGAGTATCTTCCCAGGTCAAGCTTTCAAGGAAATTGCATCCAGAGCCACGATTTAAAGCAGCGACCTTCTATACAGTGTGCGGGTGCTTCTCCTGCCAGTGCCAAGAGCCAGCCAGTGGTGAATCCAAGTCACCAACCTGCTGAATATGTGTCCAAGCATCATGGAGCACCAAAACCTGTTTGGCTTTTGGCTCTAGAAATAGTAACTGGAACTATGGTGGGCTCTCTCTTTCTGGTTGCTGTTCTCGCTGCTTTTCAGAGATGTAACAAAAAATCATCTATCATTATTCCTTGGAGAAAATCTGGAAGCCAGAAAGATCATACGGCAGTATATATAGACCCTGAGATGTTGAAGGATGTGAGAAGGTATAACAGACAAGAGCTTGAAGTGGCCTGTGAAGACTTCAGCAACATAATCGGATCCTCACCAGACAGTGTGGTTTACAAGGGAACAATGAAAGGTGGGCCTGAGATTGCTGTGATTTCCCTCTGCATCAAGGAGGAGCATTGGACAGGATACCTTGAGCTCTATTTTCAGAGAGAGGTGGCAGACTTGGCAAGGTTAAATCATGAGAATATAGGAAAACTACTTGGCTATTGTAGAGAGGATACTCCATTTACAAGGATGTTGGTTTTCGATTATGCTTCAAATGGAACACTTCATGATCACCTACATTGTTATGAAGAAGGATGTCAATTCTCTTGGACACGGCGTATGAAGATTGCAATAGGCATTGCACGCGGACTCAACTATTTGCATACTGAAGTGGAGCCTCCATTTACTATCTCAGAGCTGAATTCTAGTGCTGTATACCTTACAGAAGAATTTTCCCCAAAGTTGGTTGATTTTGAAAGTTGGAAGACAATTCTTGAAAGATCAGAAAAGAATTCTGGTTCCATTGGCAGCCAAGGTGCTATCTGTGTTCTTCCAAACTCCCTTGAAGCTCGCCAGCTTGATACCAAAGGAAACATATTTGCTTTTGGGGTACTTCTATTGGAGTTAATCAGCGGGAGACCTCCATACTGTAAGGACAAAGGATACTTGGTTGACTGGGCCAAGGACTACCTGGAAAGGCCAGATGAAATGTCAAGCGTGGTGGATCCTGAACTGAAGCATTTTAGACATGAAGACCTCAAAGTGATATGCGAGGTAATAACTCTCTGTATCAACCCTGATAAAACTGGGCATCCATCTATGCGAGAATTATGTAGCATGCTGGAGAACAGAATTGACACATCAGTAAGCGTGGAGCTCAAGTCATCATCTTTGGCTTGGGCCGAACTTGCACTTTTATCTTAA 1992 0.4322 MKPRTSLWFLSLISALSFVASNTVPSNEVWALRSFKEAVYEDLYQVLSNWDTVEADPCNWFGVTCTMLRDHVIKLNISGSSLKGFLAPELGQLAYLQELILHGNNLIGTIPRELGELKYLRVFDLGMNQLTGPIPPEIGNLTQAVKINLQSNGLTGRLPPELGNLRFLQDLRLDRNRLQGPVPAGGSSNFASNMHGMYALKENVTGLCRSSQLKVADFSYNFLVGSIPKCLEYLPRSSFQGNCIQSHDLKQRPSIQCAGASPASAKSQPVVNPSHQPAEYVSKHHGAPKPVWLLALEIVTGTMVGSLFLVAVLAAFQRCNKKSSIIIPWRKSGSQKDHTAVYIDPEMLKDVRRYNRQELEVACEDFSNIIGSSPDSVVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARLNHENIGKLLGYCREDTPFTRMLVFDYASNGTLHDHLHCYEEGCQFSWTRRMKIAIGIARGLNYLHTEVEPPFTISELNSSAVYLTEEFSPKLVDFESWKTILERSEKNSGSIGSQGAICVLPNSLEARQLDTKGNIFAFGVLLLELISGRPPYCKDKGYLVDWAKDYLERPDEMSSVVDPELKHFRHEDLKVICEVITLCINPDKTGHPSMRELCSMLENRIDTSVSVELKSSSLAWAELALLS* 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g00271 663 Gene3D Phosphorylase Kinase; domain 1 338 445 - -
Lapu2g00271 663 ProSiteProfiles Protein kinase domain profile. 364 641 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu2g00271 663 FunFam Inactive receptor-like serine/threonine-protein kinase 338 445 - -
Lapu2g00271 663 Gene3D Ribonuclease Inhibitor 26 206 IPR032675 -
Lapu2g00271 663 Pfam Leucine rich repeat N-terminal domain 27 65 IPR013210 -
Lapu2g00271 663 PANTHER PROTEIN MALE DISCOVERER 2 19 663 - -
Lapu2g00271 663 SUPERFAMILY L domain-like 26 235 - -
Lapu2g00271 663 SUPERFAMILY Protein kinase-like (PK-like) 343 638 IPR011009 -
Lapu2g00271 663 FunFam Probable leucine-rich repeat receptor-like protein kinase At2g33170 25 181 - -
Lapu2g00271 663 Pfam Protein tyrosine and serine/threonine kinase 368 635 IPR001245 GO:0004672|GO:0006468
Lapu2g00271 663 Gene3D Transferase(Phosphotransferase) domain 1 446 653 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g00271 Lapu-Chr2 2179037 2184215 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g00271 1 643 Receptor kinase-like Gene Family AT2G35620 27.576 7.73e-54 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Lapu2g00271 PK_Tyr_Ser-Thr 7.2e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g00271 - - gmx:100794714 1211.82