Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g00263 ATGGATGGAAGAGAAGGTATGGGTTTTTCTGGGGGCTCTGCTCCATATTACATGCAGCATAGAGGAGGAGGGGTTAGTGGGACTGGTCCTGGAACGGGAACATCCTCTGGCTTCCAACCACCAGCTGGGTTCAGAGCTTTGTCAAATGTCTCTTCAGGTTCTACATTTTCAGTAGAGACTAAGCCTCAACCTCAGCCTCAGCCTCAGCCTCAGTCTCAGTCTCAGTCTCAGCGTGGTGGTTTTGGTCATGGCATTAACTTTGGTTCTTCACCTGAAGGTGGAGGTGGAATGCCTTCTTCCGGTGAGCCTGTGAAAAAGAAAAGAGGGAGACCAAGGAAGTATGGTCCTGATAGTGGGACTGTTTCCCTGAGACTCTCTCCCTTGTCTGCCACTGCTAATTCCACCCCAGGAACAGGCACTCCTGCAGAGAAACGGCCCAGAGGGCGTCCACCTGGAAGTGGAAGGAAGCAACAGCTTGCCACTCTAGGTGAATGGATGAACAGTTCTGCAGGACTGGCCTTTTCACCTCATGTTATCACTGTTGGAGTTGGGGAGGACATTGTAGCAAAGTTATTCTCATTTTCACAGCAGAGACCAAGGGCTTTGTGCATCTTAACTGGAACCGGCACAGTTTCATCTGTCTCTCTGCGTCAGCCAGCTTCTACTAGCATCAGTGTTTCTTATGAGGGCCGATTTCAAATATTATGCTTGTCTGGTTCTTACTTGGTTGCTGAAGAAGGTGGACCTCGCAGTAGAACAGGTGGCATGAGTGTTTCTCTTTCTAGTCCGGATGGTCATATTATTGGTGGTGGTGTTGCTAGCCTTATAGCTGCAAGCCCAGTGCAGGTCGTGGTATGCAGTTTTGTATATGGAAGCTCTAAGCCTAAGACTAAACAAGTGACCACTGCTACGAAAGATAGCAGTTCTGAGCCTCAGAGTAGTGAGAAATTAGCTTCTCCAGCTAGTGCTCCTCCTAATCAAAACTACTCTTCTCCTGCCACAAGCATGTGGCCTGCTTCGTCAAGGCCTGTGGAGGTGAAAAGTGCACATCCATACACTGGTATTGACCTGACGCGTGGGTGA 1083 0.4931 MDGREGMGFSGGSAPYYMQHRGGGVSGTGPGTGTSSGFQPPAGFRALSNVSSGSTFSVETKPQPQPQPQPQSQSQSQRGGFGHGINFGSSPEGGGGMPSSGEPVKKKRGRPRKYGPDSGTVSLRLSPLSATANSTPGTGTPAEKRPRGRPPGSGRKQQLATLGEWMNSSAGLAFSPHVITVGVGEDIVAKLFSFSQQRPRALCILTGTGTVSSVSLRQPASTSISVSYEGRFQILCLSGSYLVAEEGGPRSRTGGMSVSLSSPDGHIIGGGVASLIAASPVQVVVCSFVYGSSKPKTKQVTTATKDSSSEPQSSEKLASPASAPPNQNYSSPATSMWPASSRPVEVKSAHPYTGIDLTRG* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g00263 360 MobiDBLite consensus disorder prediction 28 62 - -
Lapu2g00263 360 MobiDBLite consensus disorder prediction 297 338 - -
Lapu2g00263 360 CDD DUF296 176 288 IPR005175 -
Lapu2g00263 360 MobiDBLite consensus disorder prediction 297 360 - -
Lapu2g00263 360 ProSiteProfiles PPC domain profile profile. 168 310 IPR005175 -
Lapu2g00263 360 Gene3D - 176 305 - -
Lapu2g00263 360 MobiDBLite consensus disorder prediction 1 157 - -
Lapu2g00263 360 Pfam Plants and Prokaryotes Conserved (PCC) domain 176 289 IPR005175 -
Lapu2g00263 360 SUPERFAMILY AF0104/ALDC/Ptd012-like 173 291 - -
Lapu2g00263 360 MobiDBLite consensus disorder prediction 122 140 - -
Lapu2g00263 360 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 64 328 IPR039605 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g00263 Lapu-Chr2 2128654 2133311 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g00263 1 360 AT-hook Motif Nuclear Localized (AHL) Family AT1G63470 49.231 1.19e-98 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g00263 - - gmx:100790569 541.191