Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g00252 ATGTCTTCTGATCTCTATACTTTTGACATTCCTTTCCCCACACATTCAGACACAGACAACATGGTCTCCTGTGATGCAGATGGAAAGATTATGTTTTTCTCTGACCCTTATTCCTTCCCCTTCCTCACTCCCTCTCCAATTCATGATGTGGCTCAAGGGAATTTTACCAATTCTCTTCACCCTTCTTTCTTCTCTTTTTCTCCCCAGGAAAACGAGAGCCTCTCTCTTGCTAACCTCACGCAGCCTCTGTCAAATGGCTCAAATATAAAGTTTGAGTTTACAAGTTTCTCTGCTTTGCATGGCTCCGAAGTGACTAGTGAGGAGTGCCAAATGAGTTTGGCGGACTATTCCTGCAACCAGCACTTTCTTTCTCAAACTTGTCATGCTTCTGACAGTGCATCAAAGATAATACAAAGGAGCTTCAGCTGTAACTCTTTTGGTGGGACGCCAGGTTTCCCCTTTGAACCCCACCCTGACACTCTAATGGACTCCCCAAAGTTTCAATGGCATGCTCTGATTTCCCCTGAAAACAACTTCTTCACTGGACAAATGAGGAGGGTGTGCAGTACAGGAGATTTACAGAACATGAAAGCAACAGATATGTCTCAGGCGGAGAGCCCCTTGTTGGAGGAAGCATACTTCAAAGTGGGACGCTACAGTGCGGAAGAAAGAAAAGAAAAAATCTCTAAATACAGAGCGAAGAGAAGCCAGAGGAAGTTCAACAAGATTATTAAGTATGCATGCCGAAAGACGCTAGCCGACAATCGAACCCGCATACGTGGCAGATTCGCACGCAACGACGAAATCAGCGAGATTCCGAAAGCACTTTCTTCAACTTCACCCACAGAAGAATATGAAGACGAATTCTGGGTTGAATTCATTGAAGGACTAAACGAGGAGGCCATTGGTTAG 912 0.4485 MSSDLYTFDIPFPTHSDTDNMVSCDADGKIMFFSDPYSFPFLTPSPIHDVAQGNFTNSLHPSFFSFSPQENESLSLANLTQPLSNGSNIKFEFTSFSALHGSEVTSEECQMSLADYSCNQHFLSQTCHASDSASKIIQRSFSCNSFGGTPGFPFEPHPDTLMDSPKFQWHALISPENNFFTGQMRRVCSTGDLQNMKATDMSQAESPLLEEAYFKVGRYSAEERKEKISKYRAKRSQRKFNKIIKYACRKTLADNRTRIRGRFARNDEISEIPKALSSTSPTEEYEDEFWVEFIEGLNEEAIG* 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g00252 303 ProSiteProfiles CCT domain profile. 224 266 IPR010402 GO:0005515
Lapu2g00252 303 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 61 279 IPR045281 GO:0009909
Lapu2g00252 303 Pfam CCT motif 224 266 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g00252 Lapu-Chr2 2019860 2021325 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g00252 220 271 C2C2-CO-like Transcription Factor Family AT5G24930 46.154 2.02e-09 56.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lapu2g00252 CCT 1.2e-15 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g00252 - - pvu:PHAVU_002G158500g 514.612