Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g00239 ATGGACAACCCGAATCTTATTCTTTCTCAACATTTTTGTGCTGAACAAGATGATCTACTTTGCAATTTTCAGGAATTCTCGGAAACCAAAACGGTACTTGATGAATTGGAAGAGATTTATAAACCTTTCTACCCCCAAGTTCATAACAACCCTCGTTCCATCATTTCATGTTCCCCAACTATCCCTGATAAAACTGTCAAAGAACTCAAACCATCAACCAAAGTAGATTTACAAGCACAACATTTGCACGACACCGCAGTATCTAAATGCAGAAAAAGCAAGAAGAAGCAGAAGAACAAGAGGGTGGTGAAGCATGTGACAGCAGCAGATGGTGTGTCAGACCCATGGGCATGGCGCAAATATGGGCAGAAACCAATAAAGGGATCACCCTATCCACGTAGCTATTATAGATGCAGCAGCTCCAAAGCATGTTTGGCAAGGAAATACGTGGAACGTAGCCATTTGGATCCCGGAGTTTTCATAGTTACCTACACCGCAGAACACAGCCCGCACCCAACTCGCAAAAACTCACGAACACGGAAGGACAGTTCCACCATTGCACCTTCAACAACTCAT 576 0.4358 MDNPNLILSQHFCAEQDDLLCNFQEFSETKTVLDELEEIYKPFYPQVHNNPRSIISCSPTIPDKTVKELKPSTKVDLQAQHLHDTAVSKCRKSKKKQKNKRVVKHVTAADGVSDPWAWRKYGQKPIKGSPYPRSYYRCSSSKACLARKYVERSHLDPGVFIVTYTAEHSPHPTRKNSRTRKDSSTIAPSTTH 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g00239 192 SMART WRKY_cls 112 173 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu2g00239 192 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 17 184 IPR044810 GO:0003700
Lapu2g00239 192 Gene3D WRKY domain 90 166 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lapu2g00239 192 FunFam WRKY transcription factor 22 95 166 - -
Lapu2g00239 192 MobiDBLite consensus disorder prediction 167 192 - -
Lapu2g00239 192 SUPERFAMILY WRKY DNA-binding domain 107 170 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lapu2g00239 192 ProSiteProfiles WRKY domain profile. 107 169 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu2g00239 192 Pfam WRKY DNA -binding domain 114 169 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g00239 Lapu-Chr2 1893960 1894719 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g00239 91 188 WRKY Transcription Factor Family AT5G52830 63.725 1.09e-37 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lapu2g00239 WRKY 2.3e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g00239 K13426 - gmx:102667019 250.366