Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g00219 ATGCAACGCATTCTGTGCTTGGTCTCTTTGCTTTCTCTCATCCTCTCCCGACCCAATGCAGAACCCACAGAGGACAAGCAAGCTCTGCTTCACTTGGTGGAAAAGTTGGCTCCTTCACGACCCCTCAATTGGAACGCAACCTCTTCTCCTTGTACCTCTTGGACTGGTGTAACCTGTAACCCTGACCACTCACGAGTTATTGCCCTTCACTTACCAGGCTTCGGCTTTCACGGAACCATTCCTCCCAATACGTTGAGCCGCGTCACGTGTTTGCAAACACTCAGTCTCAGATCCAACTCCATAACTGGTCCTCTCCCTTCTGATTTCTCCAATCTCTCAAACCTTTCCTTTCTCTATCTTCAGTTCAACAACTTCTCTGGTCCCTTACCCGACTTCTCTGCCTTGAGGAACCTCTCTGTTGTCAACCTCTCCAATAACTGTTTCACTGGCACCATTCCTCTCTCCCTCTCCCTTCTGACTCACCTAACTGCCATCAACCTCGCCAACAACTCGCTTTCTGGCCAAATCCCTCTCTCTCTCCACAGGTTCCCCAACTCGGCTTTCCTAGGAAACAATGTCTCTCTCCAAACAATTTCGCATTCTAAATCTCCGAAACACGGTGGAACGGCGCTGTTTTGGGTTGTTGCTGCTGCTGCTCTTGTTGCTCTTGCAGCTTTCGTTGTTTTTATCTTCGTGTGCTGGTCCAGAAAGAAGAATGGGGATTCCTTTGCTCGGAAGTTGCAGAAGGGAGATATGTCTCCTGAAAAAGTAGTTTCGAGGGACCTTGATGCGAATAATAAACTCTTTTTCTTTGAGGGGTGTAGCTTTGCGTTTGACTTGGAGGATTTGTTGAGGGCTTCTGCTGAGGTATTGGGGAAGGGGACGTTTGGTGCTGCATATAAGGCTGCGTTAGAGGATGCTACCACTGTCGTTGTGAAGAGGTTGAAGGAAGTGGCTGTTGGAAAAAGGGACTTTGAGCAGCACATGGAGGTTGTTGGAAATCTGAAACATGAGAATGTGGTTCAGCTAAACGGGTATTACTATTCCAAAGATGAGAAACTCATGGTCTATGATTACTACACTCAAGGGAGTCTCTCTGCTTTGTTGCATGGTAAAAGAGGAGAGGATAGGGTGCCTTTAGATTGGGAGACCCGAATGAAAATTGCTTTGGGTGCTGCACGAGGCCTTACTCGCATCCATTGCGAGAATGGGGGGAAGCTGGTGCATGGCAACATAAGATCCTCAAATATCTTTCTGAATGCTAAACAATATGGTTGTATATCTGATCTTGGCCTGGCAACCATTATGAGTTCAGTTGCCATACCCATTTCACGAGCCGCTGGTTACAGAGCACCTGAAGTTACAGACACTAGGAAAGCAACGCAACCTGCTGATGTTTACAGCTTTGGTGTGGTATTACTAGAGCTTCTCACTGGGAAATCCCCTGTGTACACAAGTGGTGGCGATGAGATTGTGCACTTGGTGAGATGGGTTCATTCGGTTGTGAGAGAGGAGTGGACCGCAGAAGTGTTTGACCTGGAGCTGATTAGATATCCCAACATAGAGGAAGAGATGGTGGAAATGTTACAGATAGCCATGTCATGCGTGGTGAGGGTTCCTGATCAGAGGCCTAAGATGTCGGAAGTTGTAAAAATGATAGAAAATGTGAGGCAGATGGAAATTGGAGTGAGTCAACAACCATCATCCGAGAACCAAGCCAAATGTGCAACACAAACCCCTTTAACCACTTAG 1752 0.4726 MQRILCLVSLLSLILSRPNAEPTEDKQALLHLVEKLAPSRPLNWNATSSPCTSWTGVTCNPDHSRVIALHLPGFGFHGTIPPNTLSRVTCLQTLSLRSNSITGPLPSDFSNLSNLSFLYLQFNNFSGPLPDFSALRNLSVVNLSNNCFTGTIPLSLSLLTHLTAINLANNSLSGQIPLSLHRFPNSAFLGNNVSLQTISHSKSPKHGGTALFWVVAAAALVALAAFVVFIFVCWSRKKNGDSFARKLQKGDMSPEKVVSRDLDANNKLFFFEGCSFAFDLEDLLRASAEVLGKGTFGAAYKAALEDATTVVVKRLKEVAVGKRDFEQHMEVVGNLKHENVVQLNGYYYSKDEKLMVYDYYTQGSLSALLHGKRGEDRVPLDWETRMKIALGAARGLTRIHCENGGKLVHGNIRSSNIFLNAKQYGCISDLGLATIMSSVAIPISRAAGYRAPEVTDTRKATQPADVYSFGVVLLELLTGKSPVYTSGGDEIVHLVRWVHSVVREEWTAEVFDLELIRYPNIEEEMVEMLQIAMSCVVRVPDQRPKMSEVVKMIENVRQMEIGVSQQPSSENQAKCATQTPLTT* 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g00219 583 ProSitePatterns Protein kinases ATP-binding region signature. 291 322 IPR017441 GO:0005524
Lapu2g00219 583 Gene3D Ribonuclease Inhibitor 22 204 IPR032675 -
Lapu2g00219 583 FunFam Probable inactive receptor kinase RLK902 22 181 - -
Lapu2g00219 583 FunFam pollen receptor-like kinase 1 254 359 - -
Lapu2g00219 583 PANTHER OS05G0588300 PROTEIN 4 569 - -
Lapu2g00219 583 SUPERFAMILY L domain-like 37 197 - -
Lapu2g00219 583 MobiDBLite consensus disorder prediction 563 583 - -
Lapu2g00219 583 SUPERFAMILY Protein kinase-like (PK-like) 289 553 IPR011009 -
Lapu2g00219 583 Gene3D Phosphorylase Kinase; domain 1 254 359 - -
Lapu2g00219 583 ProSiteProfiles Protein kinase domain profile. 285 556 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu2g00219 583 Pfam Protein kinase domain 288 551 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu2g00219 583 Pfam Leucine rich repeat N-terminal domain 23 60 IPR013210 -
Lapu2g00219 583 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 360 567 - -
Lapu2g00219 583 Gene3D Transferase(Phosphotransferase) domain 1 361 579 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g00219 Lapu-Chr2 1725563 1728419 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g00219 14 580 Receptor kinase-like Gene Family AT4G23740 59.774 0.0 712
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lapu2g00219 Pkinase 6e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g00219 - - vun:114171626 1032.32