Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g00218 ATGACTACCCCACCCACCAACTACACTCACCACACCAAACTACTCACACTCACACACTCCCAACAACACCCACCAAAACACCCATATCCCAGACTCGTCAGAATAACCGTCACGGACACCGACGCCACTGACTCCTCCAGCGACGAAGAACAAACCTTTCACTCTTCCAAGCGCCACCGACAGCGCCACAGGAAATTCATCAACGAGATTTCTATCGAGTCCGGCGCCACCGAGAACGACGGCGCCTTTTCGAGGAAGAGAGTTCGAAGCAGGAGCGTGGTGCGTAAAGGCAGAGTTGCAGAGACTCCGCGCGTGTCGACTGGTAGGAAATTCCGCGGAGTGAGACAAAGACCGTGGGGAAAATGGGCCGCGGAGATACGAGACCCATCGAGACGCGTAAGGTTATGGTTGGGTACTTACGACACTGCAGAGGAAGCCGCCTTGGTGTACGACAACGCGGCCATTAAGCTGCGTGGACCCGACGCGCTCACCAATTTCATAACACCACCTGCCACGTCGCACAACAAAGACCCAACGCCGGTGTCCAACGGTTACGCCTCCGCTGAGGAAACTCAGAACAAAAACCTGTTTTCTCCCACTTCCGTGCTTCACTCCTGTTCCTTGTCTGAGGAAGCTGAATCCATAACCGGCAAAGACGATGATTACTCCAGCGTGTCCGAGAGTTTCAAGGCCAAAGCTGAGTCACCGTTTCCGATTCCGAGCGAACTACAGTTCGACTTCCAAGGCTGTTCGCCGGCGGCGGACATGTTCGGCGAGTTGGATAGCGCTGCGGCGCCTGAGAGTGTGCTGTTCTCCGACGATGATTGGCCTGGTGTGTTTCTCACTGCTTGTGAGGATTTCGGTTTGAAAAGTTGGCATACGGACAGAAATCGTGACTTTTTCCAAGATATCGACGATTTATTTGTCTCCGATCCCCTTCTTGCTCTCTGA 951 0.5394 MTTPPTNYTHHTKLLTLTHSQQHPPKHPYPRLVRITVTDTDATDSSSDEEQTFHSSKRHRQRHRKFINEISIESGATENDGAFSRKRVRSRSVVRKGRVAETPRVSTGRKFRGVRQRPWGKWAAEIRDPSRRVRLWLGTYDTAEEAALVYDNAAIKLRGPDALTNFITPPATSHNKDPTPVSNGYASAEETQNKNLFSPTSVLHSCSLSEEAESITGKDDDYSSVSESFKAKAESPFPIPSELQFDFQGCSPAADMFGELDSAAAPESVLFSDDDWPGVFLTACEDFGLKSWHTDRNRDFFQDIDDLFVSDPLLAL* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g00218 316 Gene3D AP2/ERF domain 109 168 IPR036955 GO:0003700|GO:0006355
Lapu2g00218 316 FunFam Ethylene-responsive transcription factor 2 109 168 - -
Lapu2g00218 316 SUPERFAMILY DNA-binding domain 110 166 IPR016177 GO:0003677
Lapu2g00218 316 PRINTS Ethylene responsive element binding protein signature 111 122 IPR001471 GO:0003700|GO:0006355
Lapu2g00218 316 PRINTS Ethylene responsive element binding protein signature 133 149 IPR001471 GO:0003700|GO:0006355
Lapu2g00218 316 ProSiteProfiles AP2/ERF domain profile. 110 167 IPR001471 GO:0003700|GO:0006355
Lapu2g00218 316 MobiDBLite consensus disorder prediction 39 62 - -
Lapu2g00218 316 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 30 232 - -
Lapu2g00218 316 CDD AP2 110 166 IPR001471 GO:0003700|GO:0006355
Lapu2g00218 316 Pfam AP2 domain 110 159 IPR001471 GO:0003700|GO:0006355
Lapu2g00218 316 SMART rav1_2 110 173 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g00218 Lapu-Chr2 1718877 1720867 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g00218 1 316 AP2-EREBP Transcription Factor Family AT4G23750 40.510 7.78e-54 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lapu2g00218 AP2 2.6e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g00218 - - vra:106777252 501.901