Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g00216 ATGGAACAGTTCCGGCATATCGGAGAGGTAGTTGGGAGTATGAAAGCGCTTATGGTTCTGCGCGATGAAATCCAAATCAACCAGAGGCAATGCTGTTTGATCCTGGACATATTCAGTTTGGCGTTGGACACGATCGCGGAGGAGATACGGCAGAACCTGAAGCTGGAGGAGAGGAACAGCAAATGGAAGCCTCTGGAATTTCCTCTGAGAGAGCTGTGCAGGGTTTTCAAGGAGGGAGAGCTTTACATAAAGCAGTGTTTGGATTCCAAAGATTGGTTGGGGAAAGCCATCACCCTCTCTCACCACCGAGACTGCGTGGAGTTCCACATCCACAACCTTCTCTGCTATTTCCCGGCGGTGATCGAGGCGATCGAGAGTGCAGGGGAGGTTTCAGGTTCGGATCCGGATGAGAAGGCAAAGAAGAAGGTGATGCTGGATCGGAAATATGACGTGGAATGGAACGACCCGGAGCTGTTCCAATGGAGGTTCGGGAAACAGTACCTGGTCCCGCGCGGGATTTGCAAGAAGTTGGAGAACGCGTGGAGAGAGGACAGGTGGAGGCTCGTGGAGGCCATCAATGAGAAGACTCTGAAGGAGGGTGCTTCTGCTTCTGCTGCGTTTAGGAAGAGCGGGCATGGCCTCGCTGATATGCTCCTCCAGAAGCTTCTCAATGGGTCGGTGATCGGACCAATTGCGGTGCTTGTTGGGTCGAAAGATTACCAGGTGAGACGCAGGTTGGGCCGCAGGAGGGACTTCAAGGAAATCCAATGGCTAGGGCATAGTTTTGCCTTGAGGAACTTTCAAGGGGAGAGAGAAGCGCACCAGGCTGAGGTTTCCTCTCTGCTCTCGCTTTCGCACCCCAACATATTGCAATACCTTTGCGGATTTTACGACGAGGACAAGCACGAGTTCTCTCTTGTGATGGAGTTGATGAACAAGGATTTGTGGACTTATATGAAAGAGAATTGTGGTCCCAGGAGGCAGATTCTGTTCTCTGTCCCTGTTGTTGTGGATCTCATGCTTCAGATGGCCAGAGGCATGGAGTACCTACATTCCCAAAACATTTGTCATGGACACCTTAACCCTTCCAATATCTACCTCAAGCCAAGGAACTCCCAAGAGGGTTATTTTCAGGCAAAGGTTGCAGGGTTCGCCTTGTCTTCCGTTAACGATGATACTGCTGATGCTAGTGCCATTCAGGACTTTAACCCTTTTACTTGGTGTGCTCCTGAAGTTCTGACCCAGTTGGAACGAACGCAGAATGGTAGTGCTTCTACTTCGAAGAAAGCCGATGCCTACAGCTTTGGGATGATATGCTTCGAATTGTTGACAGGGAAAGTGCCTTTTGAAGATAACCACCTTCAAGGAGACAGAATGAGCCAAAACATCAAGGTCGGTGAGAGACCTTTGTTTCCTTATCGTTCCCCGAAGTACCTTGTGAGTTTGATCAAGAAGTGCTGGCAAACTGACCCTGCTCAGCGTCCCAGCTTCTCCTCCATCTGTAGGATTTTACGGTACACCAAAAAGTTCCTTGCCATGAACTCAGAGTCCCAAGTTATTAACCCTGAGCTCAACGTTCTTGAGGTTCTGCCTGTGGATTGCTACGAGATAGAGACAACTTTCCTAAAGAGATCTTCAACGGAGAGGTCATCTTGTGTGTCCGCTGTGTCGCAGATACCCTATGAAATGTTTGCCTATAAGGTTGCGGAGAAAGAGAAAATGAATACCAACAACAGCACTGCGAAAGATGAGTCCAGCGAGCACCACCGAAAGGATGGGTGTAGGAGTGAAAGTGATGACCAAAGTCCAGTGTGTGATGATGATAACGCATCCATAGTGGAAGATCTGCTCCCTCAAACAACCTATCCCACATCAGTTTGTGGTGGCGCAGTGTCTGTTTCCTCTGAAGTCCCCTACAAGAAAACTGTTAGAATAAAGAAGCAAACAGATGTAAAGGCAAAGAATGATCAAGATAGTTCAAGGATGAAGAAGACACAAATGACTTTGGACCCATCTTTGAGCCCGGGAAGAATAAGACGTGCCAACACTGAGACCAATTTGAAGGGGCTCACGCCAACCCGTCCATTGAGCACTCCAAGAACACCCACAAGGAGCAGAAAAAGTGATAATGTCTCGGATTCCGACAATGGTTCGAGGATGACAACAGGTAGGCTTTCATCGTTGGCATTGAGTCCCCTAAGCCCCCAT 2208 0.49 MEQFRHIGEVVGSMKALMVLRDEIQINQRQCCLILDIFSLALDTIAEEIRQNLKLEERNSKWKPLEFPLRELCRVFKEGELYIKQCLDSKDWLGKAITLSHHRDCVEFHIHNLLCYFPAVIEAIESAGEVSGSDPDEKAKKKVMLDRKYDVEWNDPELFQWRFGKQYLVPRGICKKLENAWREDRWRLVEAINEKTLKEGASASAAFRKSGHGLADMLLQKLLNGSVIGPIAVLVGSKDYQVRRRLGRRRDFKEIQWLGHSFALRNFQGEREAHQAEVSSLLSLSHPNILQYLCGFYDEDKHEFSLVMELMNKDLWTYMKENCGPRRQILFSVPVVVDLMLQMARGMEYLHSQNICHGHLNPSNIYLKPRNSQEGYFQAKVAGFALSSVNDDTADASAIQDFNPFTWCAPEVLTQLERTQNGSASTSKKADAYSFGMICFELLTGKVPFEDNHLQGDRMSQNIKVGERPLFPYRSPKYLVSLIKKCWQTDPAQRPSFSSICRILRYTKKFLAMNSESQVINPELNVLEVLPVDCYEIETTFLKRSSTERSSCVSAVSQIPYEMFAYKVAEKEKMNTNNSTAKDESSEHHRKDGCRSESDDQSPVCDDDNASIVEDLLPQTTYPTSVCGGAVSVSSEVPYKKTVRIKKQTDVKAKNDQDSSRMKKTQMTLDPSLSPGRIRRANTETNLKGLTPTRPLSTPRTPTRSRKSDNVSDSDNGSRMTTGRLSSLALSPLSPH 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g00216 736 ProSiteProfiles Protein kinase domain profile. 240 511 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu2g00216 736 FunFam Kinase family protein 237 517 - -
Lapu2g00216 736 MobiDBLite consensus disorder prediction 576 602 - -
Lapu2g00216 736 SUPERFAMILY Protein kinase-like (PK-like) 267 510 IPR011009 -
Lapu2g00216 736 MobiDBLite consensus disorder prediction 714 736 - -
Lapu2g00216 736 Gene3D Transferase(Phosphotransferase) domain 1 249 591 - -
Lapu2g00216 736 MobiDBLite consensus disorder prediction 575 608 - -
Lapu2g00216 736 SMART serkin_6 240 507 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu2g00216 736 MobiDBLite consensus disorder prediction 647 663 - -
Lapu2g00216 736 Pfam Protein of unknown function (DUF1221) 21 236 IPR010632 -
Lapu2g00216 736 Pfam Protein tyrosine and serine/threonine kinase 270 503 IPR001245 GO:0004672|GO:0006468
Lapu2g00216 736 MobiDBLite consensus disorder prediction 664 705 - -
Lapu2g00216 736 MobiDBLite consensus disorder prediction 647 736 - -
Lapu2g00216 736 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 256 505 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g00216 Lapu-Chr2 1701888 1704936 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g00216 275 504 MAP Kinase Kinase Kinase AT1G62400 30.303 2.02e-24 104
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_Gdt Lapu2g00216 PK_Tyr_Ser-Thr 3.9e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g00216 - - vum:124844837 1134.78