Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g00210 ATGGAAAGTGAAAAAAGTTGGGAGCAGAATGCACTCGTGAGTGAGCTGATTCAGGGGTTGGAGATAGCAAGAAAGTTGCAGGAAGACTTGACTGTACCCTCTTCGGTTGACACTAGGGACTCACTACTGCAGAGGATATTGTCTTCTTATGACAAGGCTTTGCTTATTCTAAGATGGAATGCTGCACCAATTTCAAAGTCAGAAACCATGCATCAACCAACTCAAACTTCGTCACAACAGTTCCCGATATCCGTTTACCAAAGTCCTGCGAGGGAGGACTATGAAGGTGCCCGCAAGGATCATCAAGAACTAAAACTAAATGCAAAAAAAAGAAAGAAGATGCCCAAATGGACGGAACAGGTTAGAGTGAAGATCGAGAGTGGGGTTGAAGGACCTCTCCAAGATGGTTACTGCTGGAGAAAATATGGACAGAAAGACATCCTCAGCGCAAAATATCCCAGAAGCTACTATAGGTGCACATTCCGCAAAACTCGGGGCTGCTGCGCCACGAAGCAAGTGCAGAGATCAGAAGAAGACCCCAATGTCTTTGACATAACTTACCGAGGGAGCCATATCTGTTCTAAGGGAAAGGGTGTTGTTCTGACACCTAAATCAGAAGACGCAGAAGAGAAACCGCAAGGTTTTTTGCATCATCAGCAGTCATCGCAAGAAAGACTTAGAAAATACACAAATACTTTGACTGTGGAAAAAGATAACATAACGCCACATCCATTGCCTTCACTTGGATGCATGACACAAGATAACCAGCTCACCTTCCTCCCTTCCTTGGTATTAGAGAATGATCCTTTTTTCAGCAGCATTTCACAAACATCCTTGTTTTCTCCGAACACACCTAAATCAAATTATTTTGTGTCTCCGTCTTCCCTCGTACATGATGAATTCGACAGGATCTTTGACAAGCCGTGCCCTGATTCTGATGCTGCCGGGATTGTTTTAGCTGATGCATCAACCAGCAATGCTCCAATATTTGACTTTAATTTCTCACTGGATGCAGTGGGGATAATGCCTCGGGGTTTTTATCCTGACTGCACTTGA 1056 0.4413 MESEKSWEQNALVSELIQGLEIARKLQEDLTVPSSVDTRDSLLQRILSSYDKALLILRWNAAPISKSETMHQPTQTSSQQFPISVYQSPAREDYEGARKDHQELKLNAKKRKKMPKWTEQVRVKIESGVEGPLQDGYCWRKYGQKDILSAKYPRSYYRCTFRKTRGCCATKQVQRSEEDPNVFDITYRGSHICSKGKGVVLTPKSEDAEEKPQGFLHHQQSSQERLRKYTNTLTVEKDNITPHPLPSLGCMTQDNQLTFLPSLVLENDPFFSSISQTSLFSPNTPKSNYFVSPSSLVHDEFDRIFDKPCPDSDAAGIVLADASTSNAPIFDFNFSLDAVGIMPRGFYPDCT* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g00210 351 Pfam WRKY DNA -binding domain 134 193 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu2g00210 351 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 5 217 IPR044810 GO:0003700
Lapu2g00210 351 Gene3D WRKY domain 118 196 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lapu2g00210 351 ProSiteProfiles WRKY domain profile. 128 191 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu2g00210 351 FunFam WRKY transcription factor 53 119 196 - -
Lapu2g00210 351 SUPERFAMILY WRKY DNA-binding domain 132 194 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lapu2g00210 351 SMART WRKY_cls 133 195 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g00210 Lapu-Chr2 1651281 1652497 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g00210 6 346 WRKY Transcription Factor Family AT4G11070 33.724 4.25e-52 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lapu2g00210 WRKY 3.6e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g00210 - - vun:114174666 477.248