Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g00207 ATGCACTGTTACAAAGACAAATCCATAACAGAATTAATCAATAGTGAGATGGATTCCACAGATAGTACAAACACAGAATCTAAAGAAATTGAACCGTGTTACGATGACTACCCGAAGAAGAGAAAGCGCCCTTGCGAAGTGGTTGTGGTTCCCACCATGGAAAAATCCAAGGCCTACCCCTCCTCCGCAACACACGGTTCCATATCCGTCATCGGGCGCCGCCGCGCAATGGAGGACGCGGTCATGGTCGTTCCCGGTTTGGTGGCGGCGGGGCAGTCGTGTAGCGGTTACGATTTCTTCGCGGTTTACGACGGACACGGTGGGACGCTGGTGGCGAACGCTTGCCGCGACAGGCTGCACCTGCTGTTGGCGGATGAGGTGAGGGAGAACGCGGAGAAGGGATTGGATTGGTACAAGGTGATGTGTTCGTGTTTCACGAAGATGGACAAGGAGATCGGAGTTGGTGGTGAGGGCCACGAGGCGCACGATGACGGTGGCGCTAACACCATGGGTTCCACTGCGGCGGTGGTGGTGGTTGGAAAGAATGAGATTGTGGTGGCGAATTGTGGTGACTCGAGGGCGGTGTTGTGCCGTGGCGGTGTAGCTGTCCCACTTTCGCATGATCATAAGCCTGATCGTCCAGATGAAAGAGAGAGGATAGAAGCTGCTGGTGGGAGAGTGATTAATTGGAACGGAAGTCGCGTTTTGGGAGTACTTGCTACTTCCAGATCCATAGGGGATCACTCCATGAAACCTTTTGTGATATCTCAACCAGAGACGAAGGTGTACGAACGAACAGAGTCGGATGAGTTTGTGGTAGTGGCTAGTGACGGGTTATGGGATGTGGTGTCTAACAAGTTTGTTTGTGAGGTTGTACGAGGTTGCCTCCATGCCCAAATGAAAAGGAATTTAAAAGAGGACACAATTATAAGCTATGCAACCGAAGCTGCATCGTTGTTAGCAGAGTTGGCTATGGCTCGTGGAAGCAAAGACAACATCAGTGTTATAGTCATCCAACTCAACACCACTCCTTCCTCCTGA 1041 0.5139 MHCYKDKSITELINSEMDSTDSTNTESKEIEPCYDDYPKKRKRPCEVVVVPTMEKSKAYPSSATHGSISVIGRRRAMEDAVMVVPGLVAAGQSCSGYDFFAVYDGHGGTLVANACRDRLHLLLADEVRENAEKGLDWYKVMCSCFTKMDKEIGVGGEGHEAHDDGGANTMGSTAAVVVVGKNEIVVANCGDSRAVLCRGGVAVPLSHDHKPDRPDERERIEAAGGRVINWNGSRVLGVLATSRSIGDHSMKPFVISQPETKVYERTESDEFVVVASDGLWDVVSNKFVCEVVRGCLHAQMKRNLKEDTIISYATEAASLLAELAMARGSKDNISVIVIQLNTTPSS* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g00207 346 FunFam Protein phosphatase 2C 51 57 346 - -
Lapu2g00207 346 PANTHER PROTEIN PHOSPHATASE 46 339 IPR015655 GO:0004722|GO:0006470
Lapu2g00207 346 ProSiteProfiles PPM-type phosphatase domain profile. 64 340 IPR001932 -
Lapu2g00207 346 SMART PP2C_4 54 338 IPR001932 -
Lapu2g00207 346 Pfam Protein phosphatase 2C 66 333 IPR001932 -
Lapu2g00207 346 SMART PP2C_SIG_2 79 340 IPR001932 -
Lapu2g00207 346 Gene3D - 54 344 IPR036457 -
Lapu2g00207 346 CDD PP2Cc 65 340 IPR001932 -
Lapu2g00207 346 MobiDBLite consensus disorder prediction 1 30 - -
Lapu2g00207 346 ProSitePatterns PPM-type phosphatase domain signature. 99 107 IPR000222 GO:0043169
Lapu2g00207 346 SUPERFAMILY PP2C-like 56 342 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g00207 Lapu-Chr2 1624227 1625788 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g00207 61 340 PP2C-type Phosphatase Gene Family AT2G29380 50.000 9.71e-88 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g00207 K14497 - gmx:100813248 491.886