Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g00192 ATGGAATCCATATTTCAAGAAGAAGGGTCATCTTCTGTAACTTCTTCACCTCTTCAGTTCTTTTCCATGATGTCTCTTTCACCTGGCATAGGATCTCCCTATCCCTGGCTTAGAGAACTGAAATCTGAGGAGAGGGGTCTGTATTTGATCCATTTGTTGATCGGTTGTGCAAATCATGTAGCTAATGGTAGTCTTGAAAATGCAAACACGCTACTTGAGCAGATTTCCCAGCTTGCCTCTCCTGATGGGGATACCATACAGCGAGTTGCTGCGTATTTCACCGAAGCACTCGCTGATCGGATACTGAAAACGTGGCCTGGCCTCCACAGGGCACTCAATTCCACCAGAATTGCTATGGTGTCTGAGGAAATTCTTGTTCAGAAGCTCTTTTTTGAGCTTTTCCCGTTCTTGAAAACGTCATATATTCTGACAAATCAGGCTATTGTTGAAGCCATGGAAGGGGAGAAAATGGTGCATATAATTGATCTCAATGCGACCGGGCCAGCGCAGTGGATTGCTCTCCTCCGTGTTCTGAGTGCACGCCCTGAAGGCCCTCCTCATTTGAGAATTACTGGGGTGCATCACCTGAAAGAGGTTCTGGATCAGATGGCTCATAAACTCACTGAAGAGGCTGAAAAGTTGGATATCGCATTCCAATTCAACCCTGTGGTCAGCAAGATAGAAAATCTTGATTTTGACAAACTTCGTGTGAAAACTGGGGAGGCACTAGCAATTAGTTCCATTCTGCAGTTACACTCCCTTTTGGCCTTGGATGAGGATGCCTCGAGGAGAAAATCTCCTCTTCTGTCAAACAATTCAAATGCAATTCAACTGCAGAAAATCCTGCAGATGAACCCAAACACACGCGGTGATTTGGTTGAAAAGGATATGGTTCATGGCTATAGCCCAAGTCCAGATTCGGCCTCGGCCTCAGCCTCAGCTTCAGCCTCGTCCTCGCCCGGGTCTTCATCTGCGTCAATGAAATCGGAGAGCTTTCTCAATGCCTTGTGGGGGTTATCACCAAAGATCATGGTTGTAACTGAGCAAGACTTCAATCACAACAGTTCAAACCTGATGGACAGGCTGTTAGAATCTCTAAATTCTTATGCTGCATTGTTTGATTGTTTGGAATGCACTGTCTCTAGAACATCCTTGGATAGAATCAAGATTGAGAAGATGCTTTTAGGTGAGGAAATCAAGAACATCGTAGCTTGTGAGGGAGCTGAGAGAAGGGAAAGGCATGAAAAGATGGACAAGTGGATCCAGAGACTTGATTTATCTGGCTTTGTTAACGTGCCTTTAAGCCGTCAGGGTATGACGCAGGCAATGAGGTTCTTGGAGAACTATGGTTGTAATGGGTATAGGATGAGGGAGGAAAATGGTTGTGCTGTGATTTACTGGCAGGACCGTACCTTGTTTTCTGTGACAGCTTGGAGATCAAGGAGGTAA 1449 0.4541 MESIFQEEGSSSVTSSPLQFFSMMSLSPGIGSPYPWLRELKSEERGLYLIHLLIGCANHVANGSLENANTLLEQISQLASPDGDTIQRVAAYFTEALADRILKTWPGLHRALNSTRIAMVSEEILVQKLFFELFPFLKTSYILTNQAIVEAMEGEKMVHIIDLNATGPAQWIALLRVLSARPEGPPHLRITGVHHLKEVLDQMAHKLTEEAEKLDIAFQFNPVVSKIENLDFDKLRVKTGEALAISSILQLHSLLALDEDASRRKSPLLSNNSNAIQLQKILQMNPNTRGDLVEKDMVHGYSPSPDSASASASASASSSPGSSSASMKSESFLNALWGLSPKIMVVTEQDFNHNSSNLMDRLLESLNSYAALFDCLECTVSRTSLDRIKIEKMLLGEEIKNIVACEGAERRERHEKMDKWIQRLDLSGFVNVPLSRQGMTQAMRFLENYGCNGYRMREENGCAVIYWQDRTLFSVTAWRSRR* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g00192 482 ProSiteProfiles GRAS family profile. 40 479 IPR005202 -
Lapu2g00192 482 Pfam GRAS domain family 49 479 IPR005202 -
Lapu2g00192 482 MobiDBLite consensus disorder prediction 304 326 - -
Lapu2g00192 482 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 45 475 IPR005202 -
Lapu2g00192 482 MobiDBLite consensus disorder prediction 296 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g00192 Lapu-Chr2 1512274 1514549 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g00192 1 482 GRAS Transcription Factor Family AT1G50420 64.024 0.0 632
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lapu2g00192 GRAS 5e-135 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g00192 - - vun:114174232 819.305