Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g00173 ATGGGATTCTGGGGGATTGAAGTCAAACCTGGAAAACCGTGTCCCTATCACTCTGACAATGCTCGAGGGAAGCTGCACGTTACTCAGGCCACTCTAGGCATAGGCTCATCGAAGGAGAAAAGCATTCTTCAGTGCGCTTCAGGACACAAAAGTCCAGTTTTCTTGTGTTCATTGCTACCAAATAAGATTGAGTCATGCTCTTTGAATCTTAAGTTCGACATTGATGACCTAGTTGCATTCTCTGTGATTGGTTCACGAAGCATCCATCTTTCTGGTTTTTTTTCGGCTGACTATGGCGATGAGCTTAAGGATGACTACGAATATGATTCATGGGGAGAAGATATTGAAGGAACCGAGACAGATGAATCATCTGAATATGATAGTGAAGATGGATATGGGGATGGCTTTATTGTTGATAGTGATATTGACATGTACCCATCTTCACCAGTCCCAAATAGTGGAGTTGTAATTGAGGAAATAGTGGATGATGAAAAACCTGTAAATGGAGATGGTCAAAATAAACAATTGAAGAAAAAGAAACAGGTAGCTAAGTTGAAAACGAAAGACAGCTCAAATTCCGAGCTTGCAGTTGTTGCTAAGGGTGAGACTGACATTGTGGAGAGTGAAGATGAAGATGGCTTTCCAATTTCCACTGCAGAGAAAGATGTGTCTGTCTCTCAGAAGGCAGATTCAGAAATCAAAGGAGAACAAGCACGTAAGGAAACTGAGAAAGCCAACAAGAAGGAAAAAGATGTAGATCATTCTGCTAGAGTTAAACGGAAAGTTGATAGTACTGATGAAGATGAGCCACTGGATGGGAAAAAGAAGAAAAGAAACAAATTGAAGGAACGTACTAAAGGGGAAAGAGCTGATGGACCTGGCAATAGCAGTGAAACAAATGTTACTGTCCCAGATGCAAAGCATCCTGAGGAGGTCAAAACTACAACCAACCAGAGTGATCTTTCTCTGGCAAAGGATGAAAATGATGGAAAGTTGCCCAATGTCGAGGTCCGTTCTGAGAAAAAAAATAAGAAAAAGAAAAAAAAGACTCAGGATTTGGAAGGGGTTGCTGCTGCAGTTCAAAGTACTTCAAGTGCTGAAAAGCAGAATTTGTCCATCACCTCGGAGAAAAAGGGGAAGAAACCAACTGAAACCAAGCCATCTCAAGTGAGAACTTTTCCAAACGGATTGGTTATCGAGGAGCTCCTTATGGGTAAGCCTGATGGCAAAAGAGCTGCTCCTGGAAAAAAGGTCAGTGTTAAATATATTGGCAAGCTGCAAAAGGATGGGAAAATATTTGACTCAAATGTGGGAAGAGCACCCTTTAAATTTCGCCTGGGTGTTGGACAAGTCATCAAAGGGTGGGAGGTTGGGATCAATGGGATGAGGATTGGGGACAAAAGAAGGATCACAATTCCACCATCTATGGGATACGCAGACAAGCGCGTTGGGACTATACCACCAAATTCGTGGCTTGTATTTGACGTGGAGTTGGTTCATGTTGATCACTAA 1512 0.422 MGFWGIEVKPGKPCPYHSDNARGKLHVTQATLGIGSSKEKSILQCASGHKSPVFLCSLLPNKIESCSLNLKFDIDDLVAFSVIGSRSIHLSGFFSADYGDELKDDYEYDSWGEDIEGTETDESSEYDSEDGYGDGFIVDSDIDMYPSSPVPNSGVVIEEIVDDEKPVNGDGQNKQLKKKKQVAKLKTKDSSNSELAVVAKGETDIVESEDEDGFPISTAEKDVSVSQKADSEIKGEQARKETEKANKKEKDVDHSARVKRKVDSTDEDEPLDGKKKKRNKLKERTKGERADGPGNSSETNVTVPDAKHPEEVKTTTNQSDLSLAKDENDGKLPNVEVRSEKKNKKKKKKTQDLEGVAAAVQSTSSAEKQNLSITSEKKGKKPTETKPSQVRTFPNGLVIEELLMGKPDGKRAAPGKKVSVKYIGKLQKDGKIFDSNVGRAPFKFRLGVGQVIKGWEVGINGMRIGDKRRITIPPSMGYADKRVGTIPPNSWLVFDVELVHVDH* 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g00173 503 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 415 502 IPR001179 GO:0003755
Lapu2g00173 503 FunFam Peptidyl-prolyl cis-trans isomerase 389 503 - -
Lapu2g00173 503 MobiDBLite consensus disorder prediction 163 390 - -
Lapu2g00173 503 Gene3D - 355 503 IPR046357 GO:0003755
Lapu2g00173 503 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 410 499 IPR001179 GO:0003755
Lapu2g00173 503 MobiDBLite consensus disorder prediction 225 276 - -
Lapu2g00173 503 MobiDBLite consensus disorder prediction 356 372 - -
Lapu2g00173 503 MobiDBLite consensus disorder prediction 324 340 - -
Lapu2g00173 503 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 41 502 - -
Lapu2g00173 503 Pfam Nucleoplasmin-like domain 3 94 IPR041232 -
Lapu2g00173 503 MobiDBLite consensus disorder prediction 163 177 - -
Lapu2g00173 503 SUPERFAMILY FKBP-like 388 501 - -
Lapu2g00173 503 Gene3D Nucleoplasmin core domain 1 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g00173 Lapu-Chr2 1356037 1364657 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g00173 415 499 Calmodulin-binding Proteins AT5G48570 50.575 1.66e-16 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g00173 K14826 - gmx:100792856 751.51