Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g00137 ATGGACCCTTTTGATGACCTTCTTCTACCTGTTGCACGCACTCGGCCGGGTGCCAAGTTTGTTCCAAAGGCCAAACCGAAACAGCGGCCTCGAAAGGAAGAACCTTCATCGGAACATGCCACCTCATCTAAAGATGAACTTTCTGGGAATGAATTTCAAAATGCAGTTGCTTCGACGCTCGGAGTGCCAGCGGAAGAATCTATGGGATCCATTCATCATACGCAGGTAGAATTTCCAAATTCTGAAAGGGGAAATCCTAAACAAATTAGTGTGGAGGGAGATAGTGCAGCCTTGGTGGATGATTCCACAATCACAGCATCTGAAGTTGATGCTGATCAGAATTCTACATTCTTTCTAGAATCAGCACGTGAGGCTGATCCCACAGATTTTGATGGGGACTCCGTCAGTAACTTCGTTTCTGAGACCAACCTCAATAATGGCACAACACGACCAGTGCCCCCTGCTAATGTTGTAGAAAACAAATTGAATAATGTGGCTGCTCCATTTACAACTTGCTCTACCATTGATAGAATGAAGGAACTACCTAAAATCGGGGAAGGTTCATTTCTCGATAGCAACAAATATTTGGAACTTATTGACAACTCATTGCAAGTTGGCATGGATTTGGGCTTCAAAAGTGCTTCAGATAATAAGGATGCAATAATGCAGACGGTTGATTCAAAGTCAAACTTTGTAAAAGAACCAAAGTTAGTATCTGCAGAGATTGAATTGGATCCTTTCAGCGACATCGTCCCTGATCTTCCTGCTAGGAATGTTCACAAATTTAAACCCAAGATCAAGCCACGACCTAGAGTAGGCAATACTCTGGCTTCTGCTTCATCTAATGTTATGATGGAAAAATCTGTTGAGTTGCCTACTTCTTGCACAACCGACTTTCACTCTTTTCAGTCTAGTGGTGTACCAAACCAATCAACCAGTTTAGTTTTGCCTACATCAGAGATTCTTAGGACAAATGATTTTCCCAATAAGTTTGGTGACACAAACTCAAATGTTCCAACATCTGAAGACAGTAAGAGCTTGGAAGCAGCAATTCCTTCCCAATTGGATTCCCTAAATGCTATGCTTTCAGGGGATGCAGTTCATAATGGTACTAGAGATTGGCCTTCTACCTTTGGTAAATCATCTGGAGAGGCTGCGGACATTTTTTCTGGACTGGAATCCCTTGATGACTTTCTCACCCAAGCTACTACTGATACTGATACAGGAAAACCAGCTCTTCATTCTTTCAATCAGAAGGGTACAGAGGAAAATTTTGTCACAGCTGCTTGTCGTTCTACTGACTCTTATCAGGAATGTGATACTACCCAAGTTCAAAGATGTCCTGAGTATCATACACCACAAGATCCAGAAACCTTCAATGAAACTACTGTTCTCTATGAGAATGATACTCACACTAACAATAGAATGTCAGAAACAGAGGAAATTGTGGATTTGAATCCTGCATGTCCAAGAGATGATGTCTTTGATTATCAATCCATGAAATCTAGTGAAGATCCAACTTTTGGAATTCCAGAGCATGAAGAGTTGACAAATGTTGCTGATAGTTCCACATTGGCTGATTTTTTGCATGCAAATGATACAAGGGAAAAAGAAGATGCTGATCAGAGAAAAAAATATGACTCAGTGTCATGTTCTCTGAGGAAGAATAGAAGATCTTCTATTGCTGGTGAGGAGGATATTGGTGATAAAACCTCAAGGAAACTGAGAAAACCAGCTGCTTTTCAACCTGCAAACAGCTCATTGAATGAGGATGTTGAAGATAATAATAACCTTGACCCTCCTTATCATTCTAATGAACATGAACTTCAAGAAAATGATGACGACTATGAAGTTGAGCATTTATCCAAGAAGAAGAAAGGATCAAAAAGTTCACAGAAGAAATTTGTGGCTAAAACTGGAAAAACATCTCAAAAGCGTAAGAAGGTTGATAATGATGTACAAAAAACTAAGGAACCTCCTAAAAAGTTCTCTCATTCAACCCGACGAAAGAAAAGATGCGTGGACAAGGCTCTGCTGGAAATTCCTGAGGATGAACTTGATCCTCGAACATTGCCTTTTAAGGATATTATTTTGCTTGCAGAGCATAGGGAGCGGCAACTAAAAAAAGAGGCAATGACTTCAAATACGTCTTCCTCCAATCAAAGTGGTGTGGATTTTCTTCATGAGGCTGGTGCGTATAGTGAGCAGGAGTTCTCAGGTTCAGAAGATGATAGAGACCCATATAATGATCTAGCCAATGAAAGGATTACATACAATTACCAGACTTTCATGGAAAAGACACCAAAGGGGAAATGGTCAAAACAAGATACTGAATTGTTTTACGAGGCTATTAGGGAGTTGGGTACAGATTTTTCTATGATACAACAGCTTTTCCCTGATAAAACTCGAGGTCAAATCAAGTCGAAATACAAGAAGGAAGAGAAGGAGCATTATTTACGGATAAGAGATGCTATACATAACCGTACAAAAGATTACTCTCATTATAAATTGTTTATTGAACGACTACAGCAAGCTTCCACCAAGGCAGAGGAGGTTGTGGATGTAACAGCCGGAACTAATGAAGAGGCTGTGGAGGTTACAACAACTAAGCATGATGTGGATGTTAAAGCACAGGAAGATTCTGTGGCAGTTCAGAGTCCAGAGCAATCTTATGACAGTGAGGATGACTTTGAATGGTCTCAGTACAAAAGTTCCTATTGA 2721 0.4035 MDPFDDLLLPVARTRPGAKFVPKAKPKQRPRKEEPSSEHATSSKDELSGNEFQNAVASTLGVPAEESMGSIHHTQVEFPNSERGNPKQISVEGDSAALVDDSTITASEVDADQNSTFFLESAREADPTDFDGDSVSNFVSETNLNNGTTRPVPPANVVENKLNNVAAPFTTCSTIDRMKELPKIGEGSFLDSNKYLELIDNSLQVGMDLGFKSASDNKDAIMQTVDSKSNFVKEPKLVSAEIELDPFSDIVPDLPARNVHKFKPKIKPRPRVGNTLASASSNVMMEKSVELPTSCTTDFHSFQSSGVPNQSTSLVLPTSEILRTNDFPNKFGDTNSNVPTSEDSKSLEAAIPSQLDSLNAMLSGDAVHNGTRDWPSTFGKSSGEAADIFSGLESLDDFLTQATTDTDTGKPALHSFNQKGTEENFVTAACRSTDSYQECDTTQVQRCPEYHTPQDPETFNETTVLYENDTHTNNRMSETEEIVDLNPACPRDDVFDYQSMKSSEDPTFGIPEHEELTNVADSSTLADFLHANDTREKEDADQRKKYDSVSCSLRKNRRSSIAGEEDIGDKTSRKLRKPAAFQPANSSLNEDVEDNNNLDPPYHSNEHELQENDDDYEVEHLSKKKKGSKSSQKKFVAKTGKTSQKRKKVDNDVQKTKEPPKKFSHSTRRKKRCVDKALLEIPEDELDPRTLPFKDIILLAEHRERQLKKEAMTSNTSSSNQSGVDFLHEAGAYSEQEFSGSEDDRDPYNDLANERITYNYQTFMEKTPKGKWSKQDTELFYEAIRELGTDFSMIQQLFPDKTRGQIKSKYKKEEKEHYLRIRDAIHNRTKDYSHYKLFIERLQQASTKAEEVVDVTAGTNEEAVEVTTTKHDVDVKAQEDSVAVQSPEQSYDSEDDFEWSQYKSSY* 907
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g00137 906 SUPERFAMILY Homeodomain-like 770 816 IPR009057 -
Lapu2g00137 906 Pfam Myb DNA-binding like 762 845 IPR039467 -
Lapu2g00137 906 MobiDBLite consensus disorder prediction 643 661 - -
Lapu2g00137 906 MobiDBLite consensus disorder prediction 596 625 - -
Lapu2g00137 906 PANTHER RNA POLYMERASE III TRANSCRIPTION INITIATION FACTOR B 15 906 - -
Lapu2g00137 906 MobiDBLite consensus disorder prediction 1 88 - -
Lapu2g00137 906 Gene3D - 772 835 - -
Lapu2g00137 906 MobiDBLite consensus disorder prediction 73 88 - -
Lapu2g00137 906 SMART sant 768 816 IPR001005 -
Lapu2g00137 906 ProSiteProfiles SANT domain profile. 767 815 IPR017884 -
Lapu2g00137 906 MobiDBLite consensus disorder prediction 27 45 - -
Lapu2g00137 906 MobiDBLite consensus disorder prediction 557 576 - -
Lapu2g00137 906 MobiDBLite consensus disorder prediction 557 669 - -
Lapu2g00137 906 MobiDBLite consensus disorder prediction 875 906 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lapu2g00137 Myb_DNA-bind_7 2.1e-25 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g00137 K15198 - gmx:100792788 1173.3