Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g00133 ATGCTAACTCTAGCTCCTTCACTTGATACCAATACCAAAGAGGTGCCTGCACCCAAAACAGACCAAAACCAAGTTACCCAAACTACCCATGTATTCAAATCAAAATTACCAGACATACCGATATCCAACCACCTACCTCTTCACGACTACTGCTTCCAAAACCTCTCCCAGTTCGCTGACCGTCCTTGCCTCATCGTCGGCGCCGCTGCCAAAACCTACACCTACGCCGAGACGTATCTCATTTCACGCAAGATCGCAGCGGGATTCACAAACCTCGGAATCCGCAAGGGTGACGTCGTCATGATCCTCCTCCAGAACTCCGCCGAGTTCGTCCTCTCCTTCCTCGCCGCCTCCATGATCGGAGCTGTTTCCACCACCGCCAACCCGTTCTACACCGCGGCCGAGATCTTCAAGCAGTTCACCGTCTCCAAGGCCAAGCTCATCATAACTCAGGCAATGTACGTGGACAAGCTCCGCCACCACGACGCTGGAAGGAACCTCGGTGAGGACTTCAAGGTCGTGACCGTCGACGACCCGCCGGAGAATTGCCTCCACTTCTCGGTGCTCTCCGAGGCCAACGAGAGCGAGGTTCCGGAGGTGGAGATCCATCCGGACGACCCCGTGGCGCTTCCATTCTCCTCCGGCACAACGGGATTACCGAAAGGAGTGGTGCTGACGCACAAGAGTTTAACCACGAGCGTGGCGCAACAGGTGGACGGAGAGAACCCTAACCTCTACCTCACTACCGAGGACGTGCTTCTCTGCGTGCTCCCGCTGTTTCACATATTCTCGCTCAACAGCGTGCTGTTATGCGCGCTGAGGGCCGGGAGTGGCGTTTTGCTGATGCAGAAGTTCGAGATTGGGACGCTGCTGGAGCTGATACAGCGCTACCGCGTGTCGGTGGCGATGGTGGTGCCGCCGCTGGTTCTGGCTTTGGCGAAGAATCCGATGGTGGCGGATTTTGACCTGAGTTCAATACGGTTAGTTCTCTCCGGTGCTGCTCCCTTGGGGAAGGAACTCGAAGAGGCTCTCCACAGTAGGGTGCCTCACGCTGTTTTGGGACAGGGGTACGGAATGACAGAAGCAGGGCCAGTGCTGTCTATGTGCTTGGGCTTCGCAAAGCAACCATTCCCAACAAAATCGGGATCTTGTGGAACTGTTGTCAGAAATGCAGAACTAAAGGTTGTAGATCCTGAAACTGGTCGTTCTCTTGGCTACAATCAACCCGGTGAAATCTGCATCCGAGGGCTACAGATCATGAAAGGATATCTGAACGATGACAAAGCCACAGCATCGACCATCGACGCAGAGGGTTGGCTTCACACCGGCGATGTTGGCTATGTAGATGATGATGATGAAATTTTCATTGTTGACAGGGTGAAAGAACTCATTAAATTTAAAGGCTTCCAGGTGCCCCCTGCAGAACTTGAAGGGCTTCTTGTAAGCCATCCCTCCATTGCAGACGCAGCAGTTGTCCCACAAAAGGATGTTGTTGCTGGTGAACTTCCCGTTGCTTTCGTTGTGAGATCAAACGGCTTTGATCTAACAGAAGAGGCTGTAAAAGAGTTTATAGCAAAACAGGTAGTATTTTACAAAAGACTGCACAAAGTTTATTTTGTTCATGCCATTCCCAAGTCTCCATCAGGAAAGATATTAAGGAAAGATCTGAGAGCAAAGCTAGAAGCCGCCGCCGCCACTCCGACGCCATAA 1710 0.5257 MLTLAPSLDTNTKEVPAPKTDQNQVTQTTHVFKSKLPDIPISNHLPLHDYCFQNLSQFADRPCLIVGAAAKTYTYAETYLISRKIAAGFTNLGIRKGDVVMILLQNSAEFVLSFLAASMIGAVSTTANPFYTAAEIFKQFTVSKAKLIITQAMYVDKLRHHDAGRNLGEDFKVVTVDDPPENCLHFSVLSEANESEVPEVEIHPDDPVALPFSSGTTGLPKGVVLTHKSLTTSVAQQVDGENPNLYLTTEDVLLCVLPLFHIFSLNSVLLCALRAGSGVLLMQKFEIGTLLELIQRYRVSVAMVVPPLVLALAKNPMVADFDLSSIRLVLSGAAPLGKELEEALHSRVPHAVLGQGYGMTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVVDPETGRSLGYNQPGEICIRGLQIMKGYLNDDKATASTIDAEGWLHTGDVGYVDDDDEIFIVDRVKELIKFKGFQVPPAELEGLLVSHPSIADAAVVPQKDVVAGELPVAFVVRSNGFDLTEEAVKEFIAKQVVFYKRLHKVYFVHAIPKSPSGKILRKDLRAKLEAAAATPTP* 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g00133 569 Gene3D - 22 460 IPR042099 -
Lapu2g00133 569 ProSitePatterns Putative AMP-binding domain signature. 210 221 IPR020845 -
Lapu2g00133 569 FunFam 4-coumarate--CoA ligase 2 462 563 - -
Lapu2g00133 569 CDD 4CL 41 556 - -
Lapu2g00133 569 Pfam AMP-binding enzyme 54 466 IPR000873 -
Lapu2g00133 569 Pfam AMP-binding enzyme C-terminal domain 475 550 IPR025110 -
Lapu2g00133 569 Gene3D - 461 565 IPR045851 -
Lapu2g00133 569 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 27 558 - -
Lapu2g00133 569 SUPERFAMILY Acetyl-CoA synthetase-like 38 562 - -
Lapu2g00133 569 FunFam Long-chain-fatty-acid--CoA ligase FadD 33 461 - -
Lapu2g00133 569 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g00133 Lapu-Chr2 1083704 1087861 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g00133 28 473 Monolignol Biosynthesis Gene Families AT1G65060 71.269 0.0 659
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g00133 K01904 - gmx:547492 994.186