LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lapu2g00099	ATGGATTCAGAAGGCGAGATTGTTAGGACACCAAAGATGGAATTGGAAGCAGAAGTGGCTCTGAATTCAAAGATGAAGGGTTCTGGAAACATAAGCAGTAAGGATATGATATTCAGAGCTGATAAGATTGATCTCAAGAGTTTGGATGCCCAGCTGGAAAAGCACTTGAGCAGGGTTTGGTCAAGGAGCACTGAGACAAAACGGCCCAAAGAAGAGTGGGAAGTTGATTTGGCCAAATTGGATCTACGATATGTTGTGGCTCATGGAGCATATGGTACTGTATACAGGGGCACGTATGATACCCAAGACGTTGCAGTGAAAGTATTGGACTGGGGTGAGGATGGTGTAGCTACTCCTGCTGAAGCTGCTGCTTTACGAGCATCTTTTAGACAGGAGGTTGCTGTCTGGCACAAACTTGACCATCCTAATGTGACAAAATTTGTTGGAGCTTCAATGGGCACTTCAAATCTTAAGATTCCCTCAAAAAACCCTTCGAATGCGGACGAAGAAGAGTCCCTTCCTTCTAGGGCATGCTGTGTCATTGTTGAGTTTATCTCTGGTGGGACACTAAAACAATACTTGATAAAAAATAGGAGGAAGAAACTTGCTTACAAGATTGTGGTTCAGCTGGCTTTGGACCTTGCAAGGGGTCTTAATTATCTACACTCGAAGAAAATTGTTCATCGAGATGTTAAATCAGAGAATATGTTACTAAGTCCTAGTCGGAATCTAAAAATAGCTGATTTTGGAGTTGCTCGGGTTGAAGCTATGAATCCAAGTGACATGACAGGTGAAACTGGAACCCTTGGATATATGGCCCCAGAGGTTCTTGATGGGAAGCCTTACAACAGGAGATGTGATGTCTATAGCTTTGGCATTTGCTTGTGGGAAATTTACTGCTGTGATATGCCTTATCCAGATCTAAGCTTTGCTGATGTGTCATCTGCAGTTGTTCGTCACAATTTACGACCAGACATTCCAAGGTGTTGTCCAAGCGCCTTAACAAATATCATGCGGAAATGTTGGGATGCGAATCCAAACAAGCGCCCGGAAATGGAAGAGGTGGTGAGAATGCTGGAAGCACTTGATACTAGCAAAGGTGGTGGAATGATTCCAGAAGATCAGAGTTCAGGGTGCTTCTGTTTTGCCCCAACCCGTGGCCCCTAA	1167	0.4413	MDSEGEIVRTPKMELEAEVALNSKMKGSGNISSKDMIFRADKIDLKSLDAQLEKHLSRVWSRSTETKRPKEEWEVDLAKLDLRYVVAHGAYGTVYRGTYDTQDVAVKVLDWGEDGVATPAEAAALRASFRQEVAVWHKLDHPNVTKFVGASMGTSNLKIPSKNPSNADEEESLPSRACCVIVEFISGGTLKQYLIKNRRKKLAYKIVVQLALDLARGLNYLHSKKIVHRDVKSENMLLSPSRNLKIADFGVARVEAMNPSDMTGETGTLGYMAPEVLDGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVVRHNLRPDIPRCCPSALTNIMRKCWDANPNKRPEMEEVVRMLEALDTSKGGGMIPEDQSSGCFCFAPTRGP*	389

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lapu2g00099	388	Gene3D	Transferase(Phosphotransferase) domain 1	187	372	-	-
	Lapu2g00099	388	SMART	serkin_6	80	362	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lapu2g00099	388	CDD	STKc_MAP3K-like	86	359	-	-
	Lapu2g00099	388	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	226	238	IPR008271	GO:0004672\|GO:0006468
	Lapu2g00099	388	PRINTS	Tyrosine kinase catalytic domain signature	182	195	IPR001245	GO:0004672\|GO:0006468
	Lapu2g00099	388	PRINTS	Tyrosine kinase catalytic domain signature	330	352	IPR001245	GO:0004672\|GO:0006468
	Lapu2g00099	388	PRINTS	Tyrosine kinase catalytic domain signature	220	238	IPR001245	GO:0004672\|GO:0006468
	Lapu2g00099	388	PRINTS	Tyrosine kinase catalytic domain signature	286	308	IPR001245	GO:0004672\|GO:0006468
	Lapu2g00099	388	FunFam	Kinase suppressor of Ras 1	69	163	-	-
	Lapu2g00099	388	FunFam	Serine/threonine-protein kinase HT1	185	370	-	-
	Lapu2g00099	388	Pfam	Protein tyrosine and serine/threonine kinase	83	359	IPR001245	GO:0004672\|GO:0006468
	Lapu2g00099	388	Gene3D	Phosphorylase Kinase; domain 1	69	161	-	-
	Lapu2g00099	388	ProSiteProfiles	Protein kinase domain profile.	80	362	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lapu2g00099	388	SUPERFAMILY	Protein kinase-like (PK-like)	59	359	IPR011009	-
	Lapu2g00099	388	PANTHER	SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED	62	362	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lapu2g00099	Lapu-Chr2	845488	849665	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lapu2g00099	14	388	MAP Kinase Kinase Kinase	AT3G22750	78.515	0.0	622

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	TKL-Pl-4	Lapu2g00099		PK_Tyr_Ser-Thr	4e-59	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lapu2g00099	-		-	gmx:100803917	741.88