Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g00097 ATGGACACACCAGAGAGGAACCAGATCAGTGCTACCCTCTCTAAGTTTGAGGATTCACCTGTTTTCAATTATATCAACAGTTTGTCTCCTATAAAGCCCGTTAAGTCTGTTCCCATTAGTCAGACTTTCAATTCACTGAGCTTTTCGTCCCCTCCATCCGTTTTCACATCGCCCCACGTCAGCTGTCTCAAGGAATCTAGATTTCTCAGAAGACATATCCCGTTGGGCGCATCAAAGCCCAAGGTTTCTTCTGAAGATGCAAATAAAGTTCACACAAGTGAAGAGACTCTTGCAGATTCTACGCGTGCACTTCATAACTCGAGTGAATTACAGGAAGACACTGACAAAGGGATTTCTGTAGGAGATGCTTCAATTGAGATATCCAGCGAGCACATAAAATTCTCCGTTGAACCACAGCAAACTTTAAAATATAACAACTGTGGTAGCCCTGGCTATGATCCCCCACTTTGTGGTGATGAGGATAACACTCTTTTGGAACTGCCCGGTGAGGCAGCAGCAGACGCTGGCTACGTTCAGGAAGGGTGTAAAACTGATTCAGTTCAGAGTGAAGTGCATCTTCAGGAAATATGTCAGATGGAGCCAAAGAGTGAAGGTCCAGACTGTTATTGGGATAGTTTAATTCCCGATGGCCCTGATATGCTAATTTTTAATTCCCCAGGTGAAGCAGAAGCTTTTAAGGGTTTGATGCACAAACCGTTGGACTCTTCTATACGACTGAGCGATTTTATGTCTGTGCTGCCACTTTCTACTTTCCATAATGGTAGGAAAATGTACATTGTTGATTCGGTTGCTTCAGGTTCTGAACATGAAATTGGAGACCACTGTTCTGAACCAACGATAACAGCTACGCACACGGACCAAGCACGGGATAATCTTGCTGATGTTGTTTTGGTGACTAGCAATTCTAATGAGAACGCAAATGATCAGCTTGTTTCTGTCAAGCACCGTGCCATACGGAGGCGTTGTCTAGACTTTGAGATGGCCAACGTGCAAAGGAAGAACTCTGATGATAATTCAAACGTCGGTTCAAGTGCATCCGAGTCTGATGAGAGGAATGTTGCCAACGAAAAGCAACTGCTTCCAGCAAAACTCAACGGAAATTTCCAGAGGGGAATTTTGCAGGGAATTGGTCTACACCTGAATGCACTTGCTGCCTTAAAAGAATACAAGGGCATTCAAATTGAAAATTTGTCTTCTGGAAGACAACTCGGTCTGCCCAGCTCTACTTCTATGGAAATCTCTACAAGCCAAGAACATCAGCATCTATCGTTGGTACCTGTATCATCTGAAAGAGAATTGGATTCATCAGACAATGGGCTTCAGCCTGCTGACGATTGTTCCCAGCCATCAGTTTACATGGCTGGTGAAGACTTAAATAAGAATAGCCCCAGAAAGAAAAAGCGTAAGTTGGAGACACCTGGAGAAACTGAGGGCTGTAAACGCTGCAATTGCAAGAAGTCAAAGTGTTTGAAGCTTTACTGCGAGTGCTTTGCTGCTGGTGTCTACTGCATAGAACCCTGCTCCTGTCAGGATTGCTTCAACAAACCTATTCATGAAGACACTGTTCTTCAAACTCGCAAGCAGATTGAATCTCGTAACCCTCTTGCATTTGCTCCTAAAGTCATCAGAAGTTCTGATTCCGTTCCTGAAATTGGGGATGATCCAAATAAAACTCCAGCTTCAGCACGACACAAAAGAGGATGCAACTGTAAAAAATCAAGCTGCCTAAAGAAATATTGTGAATGTTATCAGGGTGGTGTCGGTTGCTCCATTGGCTGTAGATGTGAAGGGTGCAAGAATACTTTCGGCAGAAAAGATGGTTCTGCTCCTTTAGGCATAGAAACTGAGCCAGAAGAAACAGAAGCATCTGACAAGGGTGTGGCGGAAAAAGCTTCACAGAAAACTGAAATTCAGAACACTGAAGATCATCCGGATTCTGCTACTGTGTCAACACCATTACGACTTTCCAGGCCATTGCTTCCGTTGCCCTTTTCTTCAAAGGGAAAGGCACCAAGATCCTTTGTTACCACCATCTCTGGCTCTGCATTATTTACCAGCCAAAAGCTTGGGAAACCAAACTCTCTTTGGTCTCAATCTAAGCATTTTCAAACTGTTCCAGATAACGAAATTCCGGATATTCTCCTGGGTGATACCTCTCCTATCACATGCATCAAAACTTCTCCAAATGGCAAGAGGATCTCCTCTCCTAGCTGTGACTTGGGATCATCTCCTAGTCGCAGAGGTGGCAGGAAGTTGATATTACAATCCATTCCTTCATTTCCTTCTCTCACCCCTCACCCTTAG 2325 0.4409 MDTPERNQISATLSKFEDSPVFNYINSLSPIKPVKSVPISQTFNSLSFSSPPSVFTSPHVSCLKESRFLRRHIPLGASKPKVSSEDANKVHTSEETLADSTRALHNSSELQEDTDKGISVGDASIEISSEHIKFSVEPQQTLKYNNCGSPGYDPPLCGDEDNTLLELPGEAAADAGYVQEGCKTDSVQSEVHLQEICQMEPKSEGPDCYWDSLIPDGPDMLIFNSPGEAEAFKGLMHKPLDSSIRLSDFMSVLPLSTFHNGRKMYIVDSVASGSEHEIGDHCSEPTITATHTDQARDNLADVVLVTSNSNENANDQLVSVKHRAIRRRCLDFEMANVQRKNSDDNSNVGSSASESDERNVANEKQLLPAKLNGNFQRGILQGIGLHLNALAALKEYKGIQIENLSSGRQLGLPSSTSMEISTSQEHQHLSLVPVSSERELDSSDNGLQPADDCSQPSVYMAGEDLNKNSPRKKKRKLETPGETEGCKRCNCKKSKCLKLYCECFAAGVYCIEPCSCQDCFNKPIHEDTVLQTRKQIESRNPLAFAPKVIRSSDSVPEIGDDPNKTPASARHKRGCNCKKSSCLKKYCECYQGGVGCSIGCRCEGCKNTFGRKDGSAPLGIETEPEETEASDKGVAEKASQKTEIQNTEDHPDSATVSTPLRLSRPLLPLPFSSKGKAPRSFVTTISGSALFTSQKLGKPNSLWSQSKHFQTVPDNEIPDILLGDTSPITCIKTSPNGKRISSPSCDLGSSPSRRGGRKLILQSIPSFPSLTPHP* 775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g00097 774 MobiDBLite consensus disorder prediction 733 774 - -
Lapu2g00097 774 MobiDBLite consensus disorder prediction 78 117 - -
Lapu2g00097 774 MobiDBLite consensus disorder prediction 733 749 - -
Lapu2g00097 774 MobiDBLite consensus disorder prediction 336 360 - -
Lapu2g00097 774 SMART CXC_2 570 611 IPR033467 -
Lapu2g00097 774 SMART CXC_2 484 525 IPR033467 -
Lapu2g00097 774 MobiDBLite consensus disorder prediction 466 486 - -
Lapu2g00097 774 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 487 522 IPR005172 -
Lapu2g00097 774 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 573 608 IPR005172 -
Lapu2g00097 774 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 1 773 IPR044522 GO:0003700
Lapu2g00097 774 MobiDBLite consensus disorder prediction 625 648 - -
Lapu2g00097 774 MobiDBLite consensus disorder prediction 412 452 - -
Lapu2g00097 774 MobiDBLite consensus disorder prediction 412 486 - -
Lapu2g00097 774 ProSiteProfiles CRC domain profile. 485 610 IPR005172 -
Lapu2g00097 774 MobiDBLite consensus disorder prediction 613 661 - -
Lapu2g00097 774 MobiDBLite consensus disorder prediction 339 356 - -
Lapu2g00097 774 MobiDBLite consensus disorder prediction 84 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g00097 Lapu-Chr2 828652 834535 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g00097 16 773 CPP Transcription Factor Family AT4G14770 43.590 5.62e-157 469
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Lapu2g00097 TCR 2.1e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g00097 - - gmx:100804447 1343.95