Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g00081 ATGGAATCAGAAGTGAGATCGGGTGGTTCTGGGGTTGTGGTGAAGAGCAGAAATTCCTCGGGTTGTTTAATTTTGCGAAAGAAAGGGGATGGGTTAGGCGCTACTGCTTCCACTTCTAGGAAGCTCTATGAATCGAAGAAAAGGGCCAACATCAGCGTGGCCTTGAGTGATTCTGGATCAAGTGACGAGTTGCTGGTTCCTCCTGGTAGAAGGCTTGGGTCTGAGACTATTCGTGTTTGCAATGGTTTGGCTGCCTCTGAAAGGGTTGGGAGTGAAATTAGTCGGAAGAGGGACAGAATGGAACGAATTAGGGGTGCGGATAAAGGTTTGGAGCAGTGGGTAAATAAGCGTAGTAAGTTTGATGTGCACAATTTCGAAGAATATGATGATATGGAGGTGGAGAACATGAGGAGGAGGCATGGTAATGGAGTTGGTTTTGGAGGAAGAAGTTTTATGGGATCAGTGCATGCTACTAGGAGTGGCATTGATAGGGAATTGAAAAATGGCTCAAGTGGACGTCTTCTTGATAAACGAAAGAACTCTTATGTTGACAAGTCAAGTGGCTTGTTTCCAGGAGATAATGTTGATCACATTAGGTTCAAGACGAACAGAGATGGTGTTCGGCTACCTATACCCTTGCAGAGGGAGAAGTTTAATTCGGATGAGTCTATTAGGGTTCAGGGGAAAAATGGTGTTTTGAAGGTAATGGTTAAGAAGAAGCTGTGTGGGCAATCAGGACAGTATTACGATCATCACAAACCTGTGGAAAGCAGGCAAAGGTTGAAAACTGAAGAGCCCATCAAGAGGATGAAGATTGAAGAGACTGCCAAGAGGGTGAAGACTGAAGAGAATGCCAAGAGGAATGCTCCAACTCGTCCTTTATTATACTTGGAAACAAAACCTGTTGAGAAACCAGGATTACTCATGAGGCCGGAGAAGAAACTGATAGCATCAAGAAAGTCTTTGTCAAGCAAGGATAGCAAGGGTGATGAGGGGGATTCAGATAACAGTGACACATCATTGAATCCGGGAGTAAGAAATACTGAAGCTCGTAAGCCTGTGAAAAAGATGTTCTCAGAGGATGAACAGACTCCTGTGCATGATAAACTCCCAACCACAAAGACGAAAGAAGGAAAAATCAAGCGTGGTAGTGGTACAGAAAAACAGAAACTGCGAGAAAGAATAAGGGAGATGCTGCTGACTTCGGGTTGGACCATAGACTATAGACCTCGAAGGAACAGAGATTACCTGGATGCAGTTTACATTAATCCAGCAGGTACAGCCTATTGGTCTATCATCAAGGCCTATGACGCACTTCAAAAGCAATTGAATGAAGATGCTAATGAGGTCAAGGCCAAAGGGGATAGTTCGTCTTTTACACCTATTGCAGATGAGGTGCTTAGTCAGCTAACAAGGAAAACTAGGAAGAAAATGGAGAAAGAATTGAAAAACAAGAAGAAAAAATATGATAGTGAAAGTGATAATGAAAAAGAGCCTCAAATAAGAAGATCTGCCAGCAACAAGCATGCTATGAATAGCACTGATAGTGATAACAATGAGGAGAAATTAACCTCCTTTATAAAACAGGGAAGTAAGTCGATGAAAACTAAAATGTTTGAAAGTAACATTGGCAGTGCTCGCTCTAAAATCCAGAATGCTTCCCATCACTCAATTGACGGAATTGAAAAATCATCTGGATGTGATCCTCATATACATGGACGGAAGAGTAATAAACACGGGAGATGTACCTTGTTAGTTCGCAGTTCTAACAAAGGATCAAATTCAGAATCTGATGGCTTTGTCCCATACATGGGAAAACGGACAGTTCTTGCTTGGTTGATTGACTCTGGAACAGTAGAGTTAAGCCAAAAGGTTCAGTACCGCAGACGGAAGAAAGTCCTGCTGGAGGGGTGGATCACAAGAGATGGCATACATTGTGGCTGCTGTAGTAAGATCCTCACAGTTTCAAAGTTTGAGCTTCATGCAGGAAGCAAATTGCGACAGCCATATCAAAATATTTTTTTGGAATCTGGAGTTTCTCTTTTACAGTGCCAGATAGATGCTTGGAATAGACAGGAGCATTCTGAAAAAATTGGTTTCCATTCAGTAGATATTGACGGTGATGATCCAAATGATGATACTTGTGGTATATGTGCAGATGGAGGGGATTTAATCTGTTGTGATGGTTGTCCATCAACATTTCATCAGAGCTGCTTGGACATACAGAGGCTTCCTCCTGGTGAATGGAATTGTCCAAATTGCACCTGTAAATTTTGTGGCATAGCCAGTGGTCTTTCTCAAAAAGATGATGCATCTGTGCCTATCGGACATACTTGCAACTTATGTGAGAAAAAATATCATGACTCTTGCGCCAGAGAGATGGACACCCTTCCTAATATCCCCAACACATCAAGCCTTTCTTTTTGTGGGAAAGAGTGCAGGGAGCTTTCTGAACAATTGAAGAAATATCTTGGTACCAAGCATGAACTAGAAGCGGGTTTTTCGTGGTCTCTCATTCATAGAACAGATGAAGACTCAGAGGCAGCTTGCAGGGGAATTACTCAGAGGGTAGAATGCAATTCAAAGTTGGCTATTGCATTGACTGTGATGGATGAATGCTTTTTACCTGTTATTGATAGGAGGAGTGGGATCAATTTAATCCGTAACATTTTATATAATAGTGGATCAAACTTTAATCGGTTGAGCTATGATGGCTTTTACACTGCTATTTTGGAGAGAGGGGATGAAATCATTGCTGCAGCATCTATCAGGTTCCACGGAACTAAGATTGCTGAGATGCCATTCATTGGAACTCGTCACGTATATAGGCGCCAGGGGATGTGTCGCAGGCTATTTTCTTCCATTGAATCGGCCCTTTGTGCTATGAAGGTTGAAAAACTAGTTATTCCTGCAATTGCTGACCTAACACATACATGGACAACAGCTTTTGGCTTCACACATCTGGACGAATCACTCAGGCGAGAAATGAGGTCACTGAATATGGTGGTCTTCCCTGGTATTGATATGTTACAGAAGCTCTTAGTGGATGGTTCTGAGAAAATGGGATATGGAGACTATGATTTTATCCATACCAAAATGGGTTCTTCAACTCCACAAGATCCTCGTGGAAGTGATGATGTTAGTTCAAATCCTGCTAATGAGACAAATGATGAATGCAGCGATGCTTCTCAAGATCTAAACAATCAAGTTTTGGATGACGGGATTCTCTGTTCCAGATCTCATTCTGAGGAAATGGTGTCTGATTCAGTTTCAGATAAATGTGTTTCTCCTTCTAGAACTAGTCACAGTGCGCTAGAAATGAAGAATAAAGTGGTGGCTGCAATGAATTGTGATTCGTTGGAGCTTGACATTAATCCAGTGTTGGATTCTCAAAAGGCAGACAATATTCCACCTACTAAAGAGGCTCATATGAATGACGCTCTTGAAGCTGTTACTTCAGGGAGTTTATCAGAAGAGAATATTATTACAAAGGGAAGTAATCAAAGCGTAGATGTCTCCATTTCTGCTCTCAATCATGCTGACGAGAGTTTGTTGCAACTAGGATCTGGTTCCAACTGTGAAATTGGATGTGAAAATGGGAAGGGTTTGCTTTTGAACCCAATAGTTGATTCAAATGAAACATTTCTTGGTGAAAATGACCTAAATGCTTCTGGTGATAGTTCCGAGACTGTTGTGGTCTAA 3702 0.4182 MESEVRSGGSGVVVKSRNSSGCLILRKKGDGLGATASTSRKLYESKKRANISVALSDSGSSDELLVPPGRRLGSETIRVCNGLAASERVGSEISRKRDRMERIRGADKGLEQWVNKRSKFDVHNFEEYDDMEVENMRRRHGNGVGFGGRSFMGSVHATRSGIDRELKNGSSGRLLDKRKNSYVDKSSGLFPGDNVDHIRFKTNRDGVRLPIPLQREKFNSDESIRVQGKNGVLKVMVKKKLCGQSGQYYDHHKPVESRQRLKTEEPIKRMKIEETAKRVKTEENAKRNAPTRPLLYLETKPVEKPGLLMRPEKKLIASRKSLSSKDSKGDEGDSDNSDTSLNPGVRNTEARKPVKKMFSEDEQTPVHDKLPTTKTKEGKIKRGSGTEKQKLRERIREMLLTSGWTIDYRPRRNRDYLDAVYINPAGTAYWSIIKAYDALQKQLNEDANEVKAKGDSSSFTPIADEVLSQLTRKTRKKMEKELKNKKKKYDSESDNEKEPQIRRSASNKHAMNSTDSDNNEEKLTSFIKQGSKSMKTKMFESNIGSARSKIQNASHHSIDGIEKSSGCDPHIHGRKSNKHGRCTLLVRSSNKGSNSESDGFVPYMGKRTVLAWLIDSGTVELSQKVQYRRRKKVLLEGWITRDGIHCGCCSKILTVSKFELHAGSKLRQPYQNIFLESGVSLLQCQIDAWNRQEHSEKIGFHSVDIDGDDPNDDTCGICADGGDLICCDGCPSTFHQSCLDIQRLPPGEWNCPNCTCKFCGIASGLSQKDDASVPIGHTCNLCEKKYHDSCAREMDTLPNIPNTSSLSFCGKECRELSEQLKKYLGTKHELEAGFSWSLIHRTDEDSEAACRGITQRVECNSKLAIALTVMDECFLPVIDRRSGINLIRNILYNSGSNFNRLSYDGFYTAILERGDEIIAAASIRFHGTKIAEMPFIGTRHVYRRQGMCRRLFSSIESALCAMKVEKLVIPAIADLTHTWTTAFGFTHLDESLRREMRSLNMVVFPGIDMLQKLLVDGSEKMGYGDYDFIHTKMGSSTPQDPRGSDDVSSNPANETNDECSDASQDLNNQVLDDGILCSRSHSEEMVSDSVSDKCVSPSRTSHSALEMKNKVVAAMNCDSLELDINPVLDSQKADNIPPTKEAHMNDALEAVTSGSLSEENIITKGSNQSVDVSISALNHADESLLQLGSGSNCEIGCENGKGLLLNPIVDSNETFLGENDLNASGDSSETVVV* 1234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g00081 1233 ProSiteProfiles Zinc finger PHD-type profile. 712 757 IPR019787 -
Lapu2g00081 1233 MobiDBLite consensus disorder prediction 305 335 - -
Lapu2g00081 1233 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 899 991 IPR016181 -
Lapu2g00081 1233 MobiDBLite consensus disorder prediction 505 522 - -
Lapu2g00081 1233 Pfam PHD-finger 715 757 IPR019787 -
Lapu2g00081 1233 Pfam Tify domain binding domain 637 687 IPR032308 -
Lapu2g00081 1233 ProSitePatterns Zinc finger PHD-type signature. 715 754 IPR019786 -
Lapu2g00081 1233 PANTHER PHD FINGER PROTEIN 12 340 1152 IPR042163 GO:0003714|GO:0045892
Lapu2g00081 1233 Coils Coil 433 453 - -
Lapu2g00081 1233 MobiDBLite consensus disorder prediction 475 522 - -
Lapu2g00081 1233 MobiDBLite consensus disorder prediction 278 389 - -
Lapu2g00081 1233 Coils Coil 468 495 - -
Lapu2g00081 1233 SMART PHD_3 714 755 IPR001965 -
Lapu2g00081 1233 SUPERFAMILY FYVE/PHD zinc finger 704 760 IPR011011 -
Lapu2g00081 1233 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 703 807 IPR013083 -
Lapu2g00081 1233 MobiDBLite consensus disorder prediction 475 504 - -
Lapu2g00081 1233 CDD NAT_SF 910 969 - -
Lapu2g00081 1233 MobiDBLite consensus disorder prediction 349 389 - -
Lapu2g00081 1233 CDD PHD2_CHD_II 715 754 - -
Lapu2g00081 1233 MobiDBLite consensus disorder prediction 1032 1064 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g00081 Lapu-Chr2 707761 714598 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g00081 6 1015 PHD Transcription Factor Family AT4G14920 49.614 0.0 892
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Lapu2g00081 TDBD 1.4e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g00081 - - gmx:102666194 1907.49