Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g00077 ATGTGTGTAGGTAAAAAGGGAAGTTGGAGGAACAAAGGGAAACAATATTACATAGGAGGTTATGATGAATCAATAGCCATAAAATCAAACACAAACATCACTGCCGGATCAAACTCTACGTGGAAGTCACCCTCGGGTGATTTTGAATTTGGATTCCACCGTCTTCCCAGTGGTCTCTTTCTTGTGGGCATATGGTTTGGGAGAATCACAGAGAAAAGAACACTCGTATGGTACCTCACTTCCCCTGTGGAACCAAATTCCCAAATCCAATTCACTTCTGCAGGAAACCTTGTGGTAGCGTACCAAAACGGAACTACTGCTCAAACCATATACAATTCAGCAGAAGCTGGTGCTGCAACTGCAACATCTGCCCACATGCAAGATGATGGCAATTTTGTCATCAAGGACTCCAACTTAGTATCTGTGTGGCAGAGTTTCAACTCTCCAGCCAACACTATCTTACCGAACCAAACCTTGCAGAATACTAAAACCCTCTTTTCCAAGGGGAAAGGACCTTCAAACTACTCATCGGGAAGTTTCATGTTACAAGTACAAAAAGATGGCAACCTGGTGCTCAGAGCGTACCAGTGGCCAGACCCTGCATACTGGTACACTTCAACCCTAACCTCCAATGTGAGTTTGGTGTTTAATGTTACCACTGCTCTCATGTACCTTGCCAACGACTCTGGGAATATCTTCAATCTAACCAAAACCGCTCCAAACCCGGTGGAGGATTATTATCACCGTGCTACAATAGATGAGAATGGGAATTTCCAGCAATATGCATATCACAAGAGGAATGGAACCGGTTGGAGGAGGGTTTGGAGAGCTGTGGAGGATCCCTGCCGAGTGAATGTTGTCTGTGGTGTGTATGGCTTGTGCACTTCTCCTGACAATGAATCAGTCAAGTGTGAGTGTATTCCAGGTTATATCCCATTGGATGATCAAGATGTTTCTAAAGGGTGTCAGCCACCAGCTGTCGTCAATTACTGTGCAGAGACCAACTTCAAGCTCCAGGTCTTTGACGACACTGATTTCCAATTCAATACTGATTTTGTTCGCTTAGCTGGTGTTGACTTAGAAAGTTGTAAGAAGGCTGTAATAGATGATTGTAATATCGGTGCTGCAACTTATAGCCATTCCACCTCCACGTGTGTCAAGAAGAGACTGCCCTTACTGAATGCTAGAAATAGCACTTCTTCGAAGGGACTGAAAGCTCTGCTAAAAGTTGCTGACAGGGTTGAGCCTGGGACACCTAAAGTTCCTAAGAAGAAAAGTTTTAATGTAAGAGTCTTTTTGAAGGTTCTTCTTGCAGTTACTGCCACTCTTGCCTCTTTCTTGGGTGCCCTTGCTGTCTACTATCATCCTTTCACTCGGAGACTAACAAGAAGAAAGAAGCATCTGAATGCAACCGCAATTGGAATCAACTTCAGAGAATTCACCTTTCAGGAGCTGCATGAAGCAACAGACGGATTTACTAAGAGTCTTGGAAGGGGAGCTTCTGGCAAAGTCTATCGTGGTGCTTTAGTGATTGATGATGCAGAAATTTGTATTGCAGTAAAGAAACTGGAAAAGAAAATTGAGAAAAGTGAAAGAGAATTCATGACCGAGCTCAAAATTATTGGTCGTACCCATCACAGAAATTTGGTGAGGCTTTTGGGCTTTTGCATTGAGAGTAGCCATCGAATTATAGTATATGAGTTGATGCCAAATGGAGCACTGTCGAAGTTTCTGTTTGGAGAGGGAGAAAGGCCTCAATGGGGTCAGAGGATTGAAATGGCTCTTGGAGTCGCAAGAGGCTTGCTATACTTGCACGAAGAGTGCAACACCCAAATCATACATTGTGACATCAAGCCCGAAAATGTGTTACTTGATGCCAATTACACAGCAAAGATTTCAGATTTTGGGCTGTCCAAGCTTTTGAACAAAGATCAAACTAGAACAAACACTAATTTAAGAGGGACAATGGGATACATGGCACCTGAATGGCTAAAGAGTGCACCAATAACTGCCAAAGTTGACATATACAGTTTTGGGGTTATGTTATTGGAGATTATTTGCTGCAGGAGGCACGTTGAGGTTTATCAGGATGGAAAAGACAGTGAAGATGATGATTTGGTTCTTTCAAATTGGGTTTTAAGGTGTGTGGTGTCTAGGCAACTAGAGGTTGTGGTGAGACATGAGTCGGACGTGTTGAATGATTTCAAGAGGTTTGAGGAAATGGCCTTGGTTGGACTATGGTGTGTTCATCCAAATCCTTCTCTGAGGCCTTCAATGAAGCACGTGATGCAAATGCTAGATGGAACCGTGGAAGTTGGTGTTCCTCCTTTGGTTTATGATCACATGATGGCAGATCAAGGCCTGTAG 2367 0.4343 MCVGKKGSWRNKGKQYYIGGYDESIAIKSNTNITAGSNSTWKSPSGDFEFGFHRLPSGLFLVGIWFGRITEKRTLVWYLTSPVEPNSQIQFTSAGNLVVAYQNGTTAQTIYNSAEAGAATATSAHMQDDGNFVIKDSNLVSVWQSFNSPANTILPNQTLQNTKTLFSKGKGPSNYSSGSFMLQVQKDGNLVLRAYQWPDPAYWYTSTLTSNVSLVFNVTTALMYLANDSGNIFNLTKTAPNPVEDYYHRATIDENGNFQQYAYHKRNGTGWRRVWRAVEDPCRVNVVCGVYGLCTSPDNESVKCECIPGYIPLDDQDVSKGCQPPAVVNYCAETNFKLQVFDDTDFQFNTDFVRLAGVDLESCKKAVIDDCNIGAATYSHSTSTCVKKRLPLLNARNSTSSKGLKALLKVADRVEPGTPKVPKKKSFNVRVFLKVLLAVTATLASFLGALAVYYHPFTRRLTRRKKHLNATAIGINFREFTFQELHEATDGFTKSLGRGASGKVYRGALVIDDAEICIAVKKLEKKIEKSEREFMTELKIIGRTHHRNLVRLLGFCIESSHRIIVYELMPNGALSKFLFGEGERPQWGQRIEMALGVARGLLYLHEECNTQIIHCDIKPENVLLDANYTAKISDFGLSKLLNKDQTRTNTNLRGTMGYMAPEWLKSAPITAKVDIYSFGVMLLEIICCRRHVEVYQDGKDSEDDDLVLSNWVLRCVVSRQLEVVVRHESDVLNDFKRFEEMALVGLWCVHPNPSLRPSMKHVMQMLDGTVEVGVPPLVYDHMMADQGL* 789
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g00077 788 Pfam D-mannose binding lectin 81 163 IPR001480 -
Lapu2g00077 788 SUPERFAMILY alpha-D-mannose-specific plant lectins 74 208 IPR036426 -
Lapu2g00077 788 Gene3D - 23 147 IPR036426 -
Lapu2g00077 788 SUPERFAMILY Protein kinase-like (PK-like) 469 766 IPR011009 -
Lapu2g00077 788 ProSiteProfiles Bulb-type lectin domain profile. 26 147 IPR001480 -
Lapu2g00077 788 ProSitePatterns Protein kinases ATP-binding region signature. 496 522 IPR017441 GO:0005524
Lapu2g00077 788 CDD B_lectin 36 149 IPR001480 -
Lapu2g00077 788 Gene3D - 149 285 - -
Lapu2g00077 788 CDD STKc_IRAK 496 768 - -
Lapu2g00077 788 Pfam S-locus glycoprotein domain 245 312 IPR000858 GO:0048544
Lapu2g00077 788 FunFam S-receptor-like serine/threonine-protein kinase 459 568 - -
Lapu2g00077 788 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 569 774 - -
Lapu2g00077 788 Gene3D Transferase(Phosphotransferase) domain 1 569 775 - -
Lapu2g00077 788 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 33 776 - -
Lapu2g00077 788 ProSiteProfiles Protein kinase domain profile. 490 770 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu2g00077 788 ProSitePatterns Serine/Threonine protein kinases active-site signature. 612 624 IPR008271 GO:0004672|GO:0006468
Lapu2g00077 788 Pfam Protein kinase domain 494 764 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu2g00077 788 Coils Coil 520 540 - -
Lapu2g00077 788 Gene3D Phosphorylase Kinase; domain 1 456 568 - -
Lapu2g00077 788 PIRSF SRK 20 786 IPR024171 GO:0004674
Lapu2g00077 788 SMART blect_4 32 149 IPR001480 -
Lapu2g00077 788 SMART serkin_6 490 766 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g00077 Lapu-Chr2 674372 677450 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g00077 416 772 Receptor kinase-like Gene Family AT2G43700 36.088 2.78e-67 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Lapu2g00077 Pkinase 1.9e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g00077 - - gmx:102662509 1207.2