Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g00076 ATGATGTTCATTCAGCATATACATTCATGTATATATTATGACGATACAGCTTTAGTTTTGAATGCATTGCATCAGTTTTTCCTACCAAAAATGGCTATCCAATTCCTTCTTCTCTTTCTTGCATTCTTTCTATGTTCCTTTGTTAACTCAATCGAACTGGGCTCCAGCATTGTGGCTGGCACCAATTCATCTTGGCGATCGTCCACTGGGGATTATGCCTTTGGATTCTACCACCTTGCCAGTGGCCGCTATCTTGTTGGAATTTGGTTTGACAAAATTCCAAAGTCACCGTTGGTTTGGTCTGCAAACCGTGACAATCCAGTTGAAATTGGATCATCCATCAATCTCACACAAAGTGGCCAATTTGTGCTCCAACCTCTCGATGGGGCTTCATTTCCCATCTACAAAGGAACTGACACGGCATCTGCAGTGATGCAGGATGACGGGAATTTGGTCTTGAGGAATTCACTTTCCAACGTCATATGGCGGAGCTTTGATTCACCCACGGATACTCTTCTATTAGGCCAAACTTTGAATGCCAGTCAGAAACTCTACTCCAATGCCAATGGATCAGTAGACTACTCAACTGGACAATACAGTTTGGAGATCCAACCATCTGATGGCAACATTGTTCTTAATGCTTATCGGTTCACGGATTCTGCCTACTGGTGGAGTGGCACTACCGGAAACACAGGTGTTAGAATTATTTTTGACAACACAACAGCTTTTCTTTATGCAGTCAATACCACCCACCAAATATTTAGCATGACAGCTGATGTAGAGGGTGCAATCGAAGAGTACTATCATCGTGTGTTGGTGGATGACAAGGGAAACTTTCAGAAGTTGATTTACCATAAAGAAAATGGAAATGAGTGGAAACCTGTGTGGCAGGCCGTAACGAAGCCCTGCACTGTGACTGCCCTTTGTGGAGTGTATGGCTTTTGCAACACATCTGGTTCTGACACCCAAACATACAGTTGTGGCTGCTTGCCTGGCTATACTCCTTTGGATCCAACTGCACCCTCCAAGGGGTGCTATCTCAGTGAGGTCAAGGACTTGTGTGCTACAAATCCTTCTGTCTCGGACTTTAAGGTGGAAGTGAAAGAGATTCATGATGCTGATATACCAAACGCTGGCTACTTTTTTCTTGATCTACAAGTATTGGATGGGATGGATTTGGAAAGCTGCAAGAGGGAACTGGTGGATGATTGTCTCAGCATGGCTGCTGTTTTAAATGGCACTGCTTGCCATAAGAAAAAGTGGCCAATTATAAATGCCATTAGAATCATCCCAGACACTGAAAATCTTGTGATGCTTATTAAAGTTCCTCTGGTCAACAACATGGAAAATGAAAAGGATTCATCGTCTTTGGTTGTTTTGGTAGTGGCTCTCATCTCTTGCTCCCTACTTGCTGTACTGTTTGCAGCCACTGCCATTTATCATCACCCCGTTTGTCTGTATATCCTACTTAAACGGGCACCACCAAAGCCAAAGCCAAAGCCGATGGATATCAATCTGAAGGCGTATTCATTCCAACAGTTGAGAGAAGCAACAAATGAATTCAAAGAAAAACTTGGTCGAGGTGCCTATGGTACAGTGTATGGCGGGATTTTAAACTTGGAAGGTCAACAGGTTCGGGTTGCTGTCAAACAACTGGAGCAAGTAGAAGACCAAGGTGAGAAAGAATTTGTGACAGAAGTTCAAGTTATTGCTCTAACTCATCACAGAAATCTTGTTGGGCTATTGGGCTTCTGCAATGAGCAGAGTCATAGGCTTTTGGTTTATGAGAAAATGGAAAAAGGGACACTGTCCAACTTCCTTTTCGGAGAAGGGGATAAACCCAGCTGGGAGAGTAGAGTCAGAATTGTGCTTGAAATTGCAAGAGGCTTATTATATCTGCATGAAGAGTGCGATCATCAAATCATCCATTGTGACATAAAGCCTCAGAATGTTCTGCTTGACTCTAGTTATACTGCAAAGATTTCAGATTTTGGGCTGGCAAAGTTGCTAATGAAAGATAAAACTCGAACAAACACCAATGCTAGAGGGACAGTGGGATACATGGCACCAGAATGGCTAAAAAATGCACCTGTTACTACAAAGGTGGATATCTACAGCTTTGGTGTCATGTTGTTGGAAATCATATTTTGCAGAAAGCACATTGAGTTGCATCAAATTGAAGATGAAACAATGGATGATGACTTGATACTAATAGATTGGGTTCTGTATCTGGCAAAAGAAAACAATTTAAGAGCCCCAGTGATTCATCATCTTGAAGTTGAAAGTGATATCAGGAGGTTTGAAAGAATGGCAATGGTTGGTCTATGGTGCGTAAATACCAATCCAACTCTTCGACCATCTATGAAAATTGTGGTACAGATGTTGGAAGGAAACGTAGAAGTAGGAGTTCCACCACTCAAGTGA 2424 0.4237 MMFIQHIHSCIYYDDTALVLNALHQFFLPKMAIQFLLLFLAFFLCSFVNSIELGSSIVAGTNSSWRSSTGDYAFGFYHLASGRYLVGIWFDKIPKSPLVWSANRDNPVEIGSSINLTQSGQFVLQPLDGASFPIYKGTDTASAVMQDDGNLVLRNSLSNVIWRSFDSPTDTLLLGQTLNASQKLYSNANGSVDYSTGQYSLEIQPSDGNIVLNAYRFTDSAYWWSGTTGNTGVRIIFDNTTAFLYAVNTTHQIFSMTADVEGAIEEYYHRVLVDDKGNFQKLIYHKENGNEWKPVWQAVTKPCTVTALCGVYGFCNTSGSDTQTYSCGCLPGYTPLDPTAPSKGCYLSEVKDLCATNPSVSDFKVEVKEIHDADIPNAGYFFLDLQVLDGMDLESCKRELVDDCLSMAAVLNGTACHKKKWPIINAIRIIPDTENLVMLIKVPLVNNMENEKDSSSLVVLVVALISCSLLAVLFAATAIYHHPVCLYILLKRAPPKPKPKPMDINLKAYSFQQLREATNEFKEKLGRGAYGTVYGGILNLEGQQVRVAVKQLEQVEDQGEKEFVTEVQVIALTHHRNLVGLLGFCNEQSHRLLVYEKMEKGTLSNFLFGEGDKPSWESRVRIVLEIARGLLYLHEECDHQIIHCDIKPQNVLLDSSYTAKISDFGLAKLLMKDKTRTNTNARGTVGYMAPEWLKNAPVTTKVDIYSFGVMLLEIIFCRKHIELHQIEDETMDDDLILIDWVLYLAKENNLRAPVIHHLEVESDIRRFERMAMVGLWCVNTNPTLRPSMKIVVQMLEGNVEVGVPPLK* 808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g00076 807 ProSitePatterns Protein kinases ATP-binding region signature. 525 550 IPR017441 GO:0005524
Lapu2g00076 807 SUPERFAMILY Protein kinase-like (PK-like) 498 796 IPR011009 -
Lapu2g00076 807 CDD EGF 302 334 - -
Lapu2g00076 807 SMART blect_4 56 168 IPR001480 -
Lapu2g00076 807 Pfam S-locus glycoprotein domain 249 335 IPR000858 GO:0048544
Lapu2g00076 807 Gene3D Transferase(Phosphotransferase) domain 1 598 801 - -
Lapu2g00076 807 Gene3D - 168 308 - -
Lapu2g00076 807 ProSiteProfiles Protein kinase domain profile. 519 806 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu2g00076 807 ProSitePatterns Serine/Threonine protein kinases active-site signature. 641 653 IPR008271 GO:0004672|GO:0006468
Lapu2g00076 807 FunFam S-receptor-like serine/threonine-protein kinase 491 597 - -
Lapu2g00076 807 Gene3D Phosphorylase Kinase; domain 1 495 596 - -
Lapu2g00076 807 SUPERFAMILY alpha-D-mannose-specific plant lectins 84 227 IPR036426 -
Lapu2g00076 807 Gene3D - 46 167 IPR036426 -
Lapu2g00076 807 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 598 803 - -
Lapu2g00076 807 Pfam Protein kinase domain 521 793 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu2g00076 807 ProSiteProfiles Bulb-type lectin domain profile. 48 166 IPR001480 -
Lapu2g00076 807 SMART serkin_6 519 770 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu2g00076 807 CDD B_lectin 67 168 IPR001480 -
Lapu2g00076 807 PIRSF SRK 22 807 IPR024171 GO:0004674
Lapu2g00076 807 Pfam D-mannose binding lectin 98 183 IPR001480 -
Lapu2g00076 807 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 56 805 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g00076 Lapu-Chr2 671178 673601 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g00076 413 801 Receptor kinase-like Gene Family AT1G56120 38.250 1.67e-65 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Lapu2g00076 Pkinase 2.3e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g00076 - - pvu:PHAVU_002G046100g 1375.15