Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g00075 ATGGCGGAACCTGCATATATTGTAACGTCTGACAGCGAAACCACAGGAGAAGAAAAATCATCTACTTTTTCTGAAATAGCAATTGGAATTGATATTGGCACATCACAATGTAGTGTTGCTATGTGGAGTGGTTCCCGAGTGGAGCTTTTGAAGAACACAGGGAATCAAAAGATTATGAAATCTTATGTAACTTTCAAAGGTAACATCCCTTCTGGTGGAGTCTGCAATCAACTCTCCCACGAGGATGAGATGTTGTCTGGAGCCACGATTTTCAACATGAAGCGCCTGATTGGAAGAGTTGATACTGACCCAGTTGTTCAGGCCAGTAAGAATCTCCCATTTCTAGTGCAGACCTTGGACATTGGTGTTCGCCCATTTATTGCCGCATTAGTGAACAACATGTGGAGATCCACCACTCCAGAAGAAGTCCTGGCGATATTTCTGGTGGAGCTAAGAGCAATGATTGAAGCTCAGCTCAAACGACGAATAAGAAATGTGGTTCTAACAGTTCCAGTTTCATTCAGTCGATTTCAGCTAACCCGGATAGAGCGTGCCTGTGCCATGGCTGGCCTTCATGTTCTCAGGTTGATGCCTGAACCAACAGCTGTGGCTTTGTTGTATGCTCAGCAACAACAGCAAAATTATCATGAGAATATGGGCAGTGGAATCGAGAAAATTGCCCTCATTTTCAATATGGGTGCTGGTTATTGTGATGTTGCTGTCACTGCTACAGCGGGAGGAGTTTCACAGATTAAAGCCTTGGCAGGAAGTACCATTGGTGGTGAAGACTTGCTTCAGAATATGATGCGTCATCTGTTGCCAGAATCTGAAAATCTATTTCAAAACCATGGGGTCAACGAAATTAAGCGGATGGGCCTGCTACGAGTTGCAACCCAGGATGCAATTCACCAGCTTTCCTCTCAGAACAGCGTTCGGGTTGATGTAGATTTGGGAGATGATGTGAAGATATGCAAAGCTGTCGGCCGGGAGGAGTTTGAGGTGGTAAACAGAAAGGTGTTTGAGAAATGTGAAAGCCTTATCATTCAGTGTTTGAAAGATGCCAAGGTAGAAGTTGAAGATTTAAATGATGTGATAGTTGTAGGTGGATGCTCTTATATCCCAAGGGTGAAGAGTCTTGTTGCTAACATTTGTAAAGGGAAGGAACTTTATAAAGGCATGAATCCTTTGGAGGCTGCCGTTTGCGGTGCAGCAGTGGAAGGAGCAGTCGCTTCAGGCATCAATGATCCCTTGGGGAACTTGGACTTGTTAACTATCCAAGCTACACCTCTTGCCATTGGGATTCGTGCCGATGGGAACAAATTTGTGCCCGTAATTCCGAAAGATACCGCAATGCCAGCGCGAAAGGAGCTAGTCTTCACAACAATTCATGATAATCAAACCGAGGCATTGATTATTGTCTATGAAGGTGAGGGGGGAAAGGCAGAAGAAAACCACCTATTGGGATACTTCAAGATAATGGGAATACCTGCGGCGCCTAGAGGTACCCCAGAAATCAATGTGTGCATGGACATAAACGCTGCAAACGTGCTAAGAGTTTTAGCTGGTGTTGTGATGCCGGGTTCTCGCACGCCTGCTATTCCTGTTATGGAAGTAAGGATGCCATCGGTGGATGACGGGCATGGTTGGTGCGCTGAGGCACTAAATAGAAGCTATGGTGCCACACTTGATTTGGTTACTCTCCGGAAAAAGGCATAA 1716 0.4528 MAEPAYIVTSDSETTGEEKSSTFSEIAIGIDIGTSQCSVAMWSGSRVELLKNTGNQKIMKSYVTFKGNIPSGGVCNQLSHEDEMLSGATIFNMKRLIGRVDTDPVVQASKNLPFLVQTLDIGVRPFIAALVNNMWRSTTPEEVLAIFLVELRAMIEAQLKRRIRNVVLTVPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAQQQQQNYHENMGSGIEKIALIFNMGAGYCDVAVTATAGGVSQIKALAGSTIGGEDLLQNMMRHLLPESENLFQNHGVNEIKRMGLLRVATQDAIHQLSSQNSVRVDVDLGDDVKICKAVGREEFEVVNRKVFEKCESLIIQCLKDAKVEVEDLNDVIVVGGCSYIPRVKSLVANICKGKELYKGMNPLEAAVCGAAVEGAVASGINDPLGNLDLLTIQATPLAIGIRADGNKFVPVIPKDTAMPARKELVFTTIHDNQTEALIIVYEGEGGKAEENHLLGYFKIMGIPAAPRGTPEINVCMDINAANVLRVLAGVVMPGSRTPAIPVMEVRMPSVDDGHGWCAEALNRSYGATLDLVTLRKKA* 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g00075 571 PANTHER HEAT SHOCK PROTEIN 70KDA 27 521 IPR013126 GO:0005524|GO:0140662
Lapu2g00075 571 MobiDBLite consensus disorder prediction 1 20 - -
Lapu2g00075 571 FunFam Heat shock 70 kDa protein 8 416 531 - -
Lapu2g00075 571 Gene3D - 91 146 - -
Lapu2g00075 571 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 418 532 IPR029047 -
Lapu2g00075 571 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 423 528 IPR029047 -
Lapu2g00075 571 Gene3D - 212 390 - -
Lapu2g00075 571 FunFam Heat shock 70 kDa protein 8 261 342 - -
Lapu2g00075 571 SUPERFAMILY Actin-like ATPase domain 225 409 IPR043129 -
Lapu2g00075 571 ProSitePatterns Heat shock hsp70 proteins family signature 3. 364 378 IPR018181 -
Lapu2g00075 571 FunFam Heat shock 70 kDa protein 8 91 146 - -
Lapu2g00075 571 SUPERFAMILY Actin-like ATPase domain 26 209 IPR043129 -
Lapu2g00075 571 PRINTS 70kDa heat shock protein signature 26 39 - -
Lapu2g00075 571 PRINTS 70kDa heat shock protein signature 421 440 - -
Lapu2g00075 571 PRINTS 70kDa heat shock protein signature 361 377 - -
Lapu2g00075 571 PRINTS 70kDa heat shock protein signature 166 186 - -
Lapu2g00075 571 PRINTS 70kDa heat shock protein signature 502 518 - -
Lapu2g00075 571 PRINTS 70kDa heat shock protein signature 393 413 - -
Lapu2g00075 571 Pfam Hsp70 protein 27 521 IPR013126 GO:0005524|GO:0140662
Lapu2g00075 571 Gene3D Actin; Chain A, domain 4 261 342 - -
Lapu2g00075 571 CDD HSP70_NBD 28 408 - -
Lapu2g00075 571 Gene3D - 28 408 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g00075 Lapu-Chr2 665430 668566 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g00075 21 521 Calmodulin-binding Proteins AT1G16030 36.561 9.66e-99 311