Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g00074 ATGGCTACTGAATTTCTTGATCTCTCTTTTGCCGTACTTCTGTTTTTCAATGTTCCAAGCATCGCCAACTCAATTGAACTGGGATCAAGCATTGTGGCTGGAAGTGGCACCAATTCATCTTGGCGATCATCCTCAGGGGATTATGCTTTTGGATTCTACCACCTTGTTAGTGGCCGCTATCTTGTTGGAATTTGGTTTGATAAAATTCCAAAGAAAACATTGGTTTGGTCTGCAAACCGTGACAACCCAGTTGAAATTGGATCCTCCATCAATCTCACACGAAGTGGCCAATTTATGCTCCAACCTCTCAACGGGGCTTCATTTCCCATCTACAAAGGAACAGACACGGCATCTGCAGTGATGCAGGATGACGGGAATTTGGTCTTGAGGAATTCACTTTCCAACGTCATATGGCGGAGCTTTGATTCACCCACGGATACTCTTCTATTAGGCCAAACTTTGAATGCCAGTCGGAAACTCTACTCCAATGCCAATGGATCAGTGGACTACTCAACTGGACAATACAGTTTGGAGATCCAACCATCTGATGGCAACATTATTCTTAAAGCTTATCGGTTCACGGATTCTGCCTACTGGTGGAGTGACACTGCCCAAAACACAGGTGTCAGAATTATTTTTGACAACACAACAGCTTTTCTTTATGCAGTCAATGCCTCCCACCAAATTATATTTAACATGACAACTGATGTAGTGGGTGCAATCGAAGACTACTATCATCGTGTGTTGGTAGATGACAAGGGAAACTTTCAGAAGTTGATTTACCATAAAGAAAATGGAAATGAGTGGAGATCTCTGTGGCAGGCAGTAACAAAGCCATGCACTGTGACTGCCCTTTGTGGGGTGTATGGCTTTTGCAACACATCTGGTTCTGACACCCAAACATACAGTTGCGGTTGCTTGCCTGGCTATACTCCTTTCGATCCAACAGCACCCTCCAAGGGGTGCTATCTCAGTGAGGTCAAGGACTTGTGTGCTGCAAATTCTTCTGCCTCAAACTTTAAGGTGGAAGTGAAAGAGATTCAAAATGCTGATATACCAAACGACGGTTACTTTTTTCTTGATCTACAAGTATTGGATAGGATGGATTTGGAAAGCTGCAAGAGGGAACTAATGGATGATTGTCTCTGCATGGCTGCTGTTTTAGATGGCACTGCTTGCCATAAGAAAAAGTGGCCAATTATAAATGCCATAAGAATCATCCCTGACACTAGTAATCGTGTGATGCTGATTAAAGTTCCCCTGGCTGACAACATGGACAAGGAAAAGGATTCATCCTCTTTGGTTGTTTTGATAGTGGCTCTCATCTCTTGTTCCCTAATTGCTGTACTGTTTGCAGCCACTGCCATTTATCATCACCCCGTTTGTCAGCGTCTTATGCACAAACGAGCACCACCAAAGTCAAAGCCTATGGATATCAATCTAAAGGTATTTTCATTCCAACAGTTGAGAGAAGCAACTAATGGATTCAAGGAAAAACTTGGTCGAGGTGCCTATGGTACGGTGTATAGTGGGGTTCTAAACATGGAGGATCAACAGGTTGAGGTTGCTGTGAAGCAACTGGAGCAAGTAGAAGACCAAGGCGATAAAGAATTTGTGACAGAAGTTCAAGTTATTGCTCTCACTTATCACAGAAATCTAGTTGGTTTATTGGGCTTTTGCAATGAGCAGAGTCATAGGCTTTTGGTTTACGAGAAAATGGAAAATGGGACACTATCCAACTTCCTTTTTGGAGGAGATAAACCCAGATGGGAGAGTAGAGTTAGGATTGTTCTTGAAATTGCAAGAGGCTTATTGTATCTGCATGAGGAGTGTGACCAACAAATCATCCATTGTGACATAAAGCCTCAGAATGTTCTGCTTGACTCTAGTTACACCGCAAAGATTTCAGATTTTGGGTTGGCAAAGCTGCTAATGAAAGATAAAACTCGAACAAACACCAATGCTAGAGGGACAATGGGGTATATGGCACCAGAATGGCTAAAAAATGCACCTGTTACTACAAAGGTGGATATCTACAGCTTTGGCGTCATGTTGCTGGAAATCATATTTTGCAGAAGGCATATCGAGTTGCATGAGATTGAGGATGGAACAAGGGGTGATGACATGATACTCGTAGACTGGGTTCTATATTTAGCAATTGAAAACAATCTAAGAGCCGCAGTGATTGATGATGTTGAAGTTGAGAGTGATTTCAACAGGTTCGAAAGAATGGCAATGGTAGGTTTATGGTGTATAAATCCCAATCCAACTCTTCGACCATCTATGAAAATGGTGGTACAAATGTTGGAAGGAAACGTAGGAGTGGGTGTTCCACCACTCAAC 2343 0.4259 MATEFLDLSFAVLLFFNVPSIANSIELGSSIVAGSGTNSSWRSSSGDYAFGFYHLVSGRYLVGIWFDKIPKKTLVWSANRDNPVEIGSSINLTRSGQFMLQPLNGASFPIYKGTDTASAVMQDDGNLVLRNSLSNVIWRSFDSPTDTLLLGQTLNASRKLYSNANGSVDYSTGQYSLEIQPSDGNIILKAYRFTDSAYWWSDTAQNTGVRIIFDNTTAFLYAVNASHQIIFNMTTDVVGAIEDYYHRVLVDDKGNFQKLIYHKENGNEWRSLWQAVTKPCTVTALCGVYGFCNTSGSDTQTYSCGCLPGYTPFDPTAPSKGCYLSEVKDLCAANSSASNFKVEVKEIQNADIPNDGYFFLDLQVLDRMDLESCKRELMDDCLCMAAVLDGTACHKKKWPIINAIRIIPDTSNRVMLIKVPLADNMDKEKDSSSLVVLIVALISCSLIAVLFAATAIYHHPVCQRLMHKRAPPKSKPMDINLKVFSFQQLREATNGFKEKLGRGAYGTVYSGVLNMEDQQVEVAVKQLEQVEDQGDKEFVTEVQVIALTYHRNLVGLLGFCNEQSHRLLVYEKMENGTLSNFLFGGDKPRWESRVRIVLEIARGLLYLHEECDQQIIHCDIKPQNVLLDSSYTAKISDFGLAKLLMKDKTRTNTNARGTMGYMAPEWLKNAPVTTKVDIYSFGVMLLEIIFCRRHIELHEIEDGTRGDDMILVDWVLYLAIENNLRAAVIDDVEVESDFNRFERMAMVGLWCINPNPTLRPSMKMVVQMLEGNVGVGVPPLN 781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g00074 781 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 573 776 - -
Lapu2g00074 781 FunFam S-receptor-like serine/threonine-protein kinase 463 572 - -
Lapu2g00074 781 Gene3D - 145 285 - -
Lapu2g00074 781 PIRSF SRK 1 781 IPR024171 GO:0004674
Lapu2g00074 781 SMART blect_4 22 144 IPR001480 -
Lapu2g00074 781 Gene3D Transferase(Phosphotransferase) domain 1 573 774 - -
Lapu2g00074 781 Pfam D-mannose binding lectin 73 159 IPR001480 -
Lapu2g00074 781 Gene3D - 20 143 IPR036426 -
Lapu2g00074 781 SUPERFAMILY alpha-D-mannose-specific plant lectins 60 203 IPR036426 -
Lapu2g00074 781 CDD EGF 279 311 - -
Lapu2g00074 781 Pfam S-locus glycoprotein domain 242 312 IPR000858 GO:0048544
Lapu2g00074 781 CDD B_lectin 43 144 IPR001480 -
Lapu2g00074 781 Pfam Protein kinase domain 497 767 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu2g00074 781 Gene3D Phosphorylase Kinase; domain 1 468 571 - -
Lapu2g00074 781 ProSitePatterns Serine/Threonine protein kinases active-site signature. 615 627 IPR008271 GO:0004672|GO:0006468
Lapu2g00074 781 ProSiteProfiles Bulb-type lectin domain profile. 28 142 IPR001480 -
Lapu2g00074 781 CDD STKc_IRAK 500 771 - -
Lapu2g00074 781 SMART serkin_6 494 769 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu2g00074 781 SUPERFAMILY Protein kinase-like (PK-like) 474 770 IPR011009 -
Lapu2g00074 781 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 36 778 - -
Lapu2g00074 781 ProSiteProfiles Protein kinase domain profile. 494 780 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu2g00074 781 ProSitePatterns Protein kinases ATP-binding region signature. 500 525 IPR017441 GO:0005524
Lapu2g00074 781 Coils Coil 513 533 - -
Lapu2g00074 781 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase LECRK1 20 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g00074 Lapu-Chr2 661696 664118 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g00074 399 780 Receptor kinase-like Gene Family AT1G53430 38.718 4.65e-66 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Lapu2g00074 Pkinase 1.6e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g00074 - - pvu:PHAVU_002G046100g 1364.75