Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g00073 ATGTCTTTAGCTATCTTTTTGCCTTGCACTATTGCATTGCTTTCACTTTCACATCTGAATGGCTTACATGCCATACAATCAAATACAATCATCACTGCGGGATCCAATTCTACCTGGAAGTCTCCCTCCAGTGATTTTGAATTTGGATTCTATGCTCTTCCCAATGGTCTCTTTCTTGTGGGAATATGGTTTGGGAGAATCCCAGAGAGAACGCTCGTATGGTACCTCGGTCCCCCTGTAGAACCAAATTCCCAAATCCAATTCACTTCTGCAGGGCAACTTGTGGTAGTATACCCAAACGGGACTACTGCTCAGACCATATATAGTGGAGGAAACGGTGGGGCTGCAACATCTGCCACCATGCAAGATGATGGCAATTTTGTCATGAAGAACTCCAACTTAAGACCTGTGTGGGAGAGTTTCAACTTTTCCGCCAACACAATCTTACCAGGCCAAACCTTGCAGACTAATCAAAGCCTCTATTCCAAGGGGAGAGGACCTTCAAACTACTCGTTGGGAAATTTCATGTTACAAATGCAAGGTGATGGCAACTTGTTGCTCAAAGCACACCAATGGTCTGATCCTGCATACTGGTACACTTCAACCACCACCCCAAATGTAAATTTGCTGTTTAATGCCACCACCGCTCTCATGTACCTTGTCGGCGGCACCGGGAACATCTACTCTATTACCAACACCACTCCAACTCCGGTGGAGGATTATTATCATCGTGCTACAATAGACGAGAATGGGAATTTCCTGCAATATGCATATCAGAAAAGGAATGGGAGCGGGTGGAGTCGGGTTTGGAGAGCTGTGGAGGATCCCTGTCGAGTGAATGTTGTCTGTGGTGTGTATGGCTTGTGCACTTCTCCTGACAATGAATCAGTCAAGTGTGAGTGTATTCCAGGTTATATCCCATTGGATGATCAAGATGTTTCTAAAGGGTGTCAGCCACCAGCTGTCGTCAATTACTGTGCAGAGACCAACTTTAAGCTCCAGGTCTTTGACGACACTGATTTCCAATTCAATACTGATTTTGTTCGCTTAGCTGGTGTTGACTTAGAAAGTTGTAAGAAGGCTGTAATAGATGATTGTAATATCGGTGCTGCAACTTATAACCATTCCACCTCCACGTGTGTTAAGAAGAGACTGCCCTTACTGAATGCTAGAAATAGCACTTCTTCGAAGGGACTGAAAGCTCTGCTTAAAGTTGCTGACAGGGTTGAGCCTGGGACACCTAAAGTTCCTAAGAAGAAAAGTTTTAATGTAAGAGTCTTTTTGAAGGTTCTTCTTGCAGTTACTGCCACTCTTGCCTCTTTCTTGGGTGCCCTTGCTGTCTACTATCATCCTTTCACTCGGAGACTAACAAGAAGAAAGAAGCATCTGAATGCAACCGCAATTGGAATCAACTTCAGAGAATTCACCTTTCAGGAGCTGCATGAAGCAACAGACGGATTCACTAGGATTCTTGGAAGGGGAGCTTCAGGCAAAGTCTGTCGTGGTGATTTAATAATAGACGGCGCAGAGATTGGTATTGCAGTAAAGAAACTGGAAAAGAAAATTGAGAAAAGTGAGAGAGAATTCATGACCGAGCTCAAAATTATTGGTCGTACCCATCACAGAAATTTGGTCAGGCTTTTGGGCTTTTGCATTGAGAGTAGCCATCGAATTATAGTATATGAGTTGATGCCAAATGGAGCACTGTCCAGGTTTCTGTTTGGAGAGGGAGAAAGGCCTCAATGGGGTCAGAGGATTGAAATGGCTCTTGGAGTCGCAAGAGGCTTGCTATACTTGCACGAAGAGTGTGTGGTGTCTAGGCAACTAGAGCTAGTTGTGAGACATGACAGAGAAGTGCTGAATGATTTCAAGAAGTTTGAGGAAATGGCCTTGGTTGGACTATGGTGTGTTCATCCAAATCCTTCGCTGAGGCCTTCAATGAAGCACGTGATGCAAATGCTAGATGGAACCGTGGAAGTTGGAGTTCCTCCTTTGGTTTATGATCTGATAATGTCATATCAGGACCAATAG 2031 0.4436 MSLAIFLPCTIALLSLSHLNGLHAIQSNTIITAGSNSTWKSPSSDFEFGFYALPNGLFLVGIWFGRIPERTLVWYLGPPVEPNSQIQFTSAGQLVVVYPNGTTAQTIYSGGNGGAATSATMQDDGNFVMKNSNLRPVWESFNFSANTILPGQTLQTNQSLYSKGRGPSNYSLGNFMLQMQGDGNLLLKAHQWSDPAYWYTSTTTPNVNLLFNATTALMYLVGGTGNIYSITNTTPTPVEDYYHRATIDENGNFLQYAYQKRNGSGWSRVWRAVEDPCRVNVVCGVYGLCTSPDNESVKCECIPGYIPLDDQDVSKGCQPPAVVNYCAETNFKLQVFDDTDFQFNTDFVRLAGVDLESCKKAVIDDCNIGAATYNHSTSTCVKKRLPLLNARNSTSSKGLKALLKVADRVEPGTPKVPKKKSFNVRVFLKVLLAVTATLASFLGALAVYYHPFTRRLTRRKKHLNATAIGINFREFTFQELHEATDGFTRILGRGASGKVCRGDLIIDGAEIGIAVKKLEKKIEKSEREFMTELKIIGRTHHRNLVRLLGFCIESSHRIIVYELMPNGALSRFLFGEGERPQWGQRIEMALGVARGLLYLHEECVVSRQLELVVRHDREVLNDFKKFEEMALVGLWCVHPNPSLRPSMKHVMQMLDGTVEVGVPPLVYDLIMSYQDQ* 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g00073 676 Pfam Protein tyrosine and serine/threonine kinase 488 609 IPR001245 GO:0004672|GO:0006468
Lapu2g00073 676 ProSiteProfiles Bulb-type lectin domain profile. 22 142 IPR001480 -
Lapu2g00073 676 SMART blect_4 32 144 IPR001480 -
Lapu2g00073 676 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 608 664 - -
Lapu2g00073 676 Coils Coil 515 535 - -
Lapu2g00073 676 FunFam S-receptor-like serine/threonine-protein kinase 454 563 - -
Lapu2g00073 676 ProSiteProfiles Protein kinase domain profile. 485 676 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu2g00073 676 SUPERFAMILY Protein kinase-like (PK-like) 472 608 IPR011009 -
Lapu2g00073 676 Gene3D - 144 281 - -
Lapu2g00073 676 Pfam S-locus glycoprotein domain 239 307 IPR000858 GO:0048544
Lapu2g00073 676 Gene3D - 23 142 IPR036426 -
Lapu2g00073 676 ProSitePatterns Protein kinases ATP-binding region signature. 491 517 IPR017441 GO:0005524
Lapu2g00073 676 SUPERFAMILY alpha-D-mannose-specific plant lectins 58 202 IPR036426 -
Lapu2g00073 676 Pfam D-mannose binding lectin 79 159 IPR001480 -
Lapu2g00073 676 Gene3D Transferase(Phosphotransferase) domain 1 472 660 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g00073 Lapu-Chr2 658659 661026 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g00073 411 604 Receptor kinase-like Gene Family AT2G43700 36.224 4.41e-31 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Lapu2g00073 PK_Tyr_Ser-Thr 1.7e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g00073 - - gmx:102662509 925.235