Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g00061 ATGGGTACGATGCTACAAACCATTCTCACTGTGCTCCTTCTCCTTATGCTTCTTCTCATCATCATCTTCCTCTTCTTTCTCTTCAAACCATGGCGCTTCTTTTCATCTTCGCGTTTCCTCTCATCTATCAAGGGCGAGCTAGAGCGCCCCCTTGTTGCCGACGAAGAAGATGCAAATGCGTCGCCGTTAAATCAGATCAATGAATTGCCTCGAGATTATGATCTGGAGGGTGCCTGTTATCCCAGCGAAGCTCATTTTCGCTCTCCTCGGACCCATGGCCAAGGGCTTGTTCATAAGCAAAGGTTTCAAACCCCTTCTGTTCCACCTACTATACCCCACTGTGGTGATACTTTGGTCGTGGATGTGGTCTCTGATCCTTACACTGAGGATCTTGATGTTGGTCAAACGCTTAAGCTTTCCCCAGCTCAATTAGCTCTATTTCAAAAGCAGGGCCAGCCCAATTTTCGAAATGATAGACTGCAGGACTTAGTGCAAAGGAATATCTCTGATCAAAGAAGTTGTCTCACTCTGGAGGTTATCAGTGGCCCTTCTCGGGGACTTCGTTGTTCTGTACAGTCGATCAATTCGTCTCGTCTACCACTAACCTTGGGAAGAGTTTCTCCGAGTGATTTGTTGATAAAGGATTCTGAAGTGTCAGGAAAGCATGCGATGATAAAGTGGAATTTGGATAAAATGAAATGGGAGTTGGTGGATATGGGTAGTCTGAATGGAACACTGTTGAATTCTAAGCAAATCAACCATCCAGACACTGAAAGTAGGAATTGGGGAAATCCCACGAGTCTTGCTAATGGAGATATCATAACACTTGGAACAACATCAAAAGTAATGGTTCATATTACTTCACAAACCCAGCATCACATTCCCTTTGGAGTTGGCATGGCATCAGATCCAATGGCTATGCGCCGAGGAGGCAAAAGGTTTGCTATGGAAGATGTTTGCTATTATCAATGGCCTCTATCTGGGCTAGATCAGTTTGGACTTTTTGGCGTATGTGATGGCCATGGTGGAGATGGGGCTGCCAAATCTGCTAGCAAACTTTTCCCCGAGATAATTGCTAGTATATTATCGGATTCATTGAGGAGGGAGAGAGTTTTGTCACTCCGCGATGCTTCAGATATTCTTCGAGATGCATTTTCTCAAACAGAAGCTCATATGAATCACCATTATGAGGGATGTACAGCGACAGTGCTTCTGGTGTGGACTGATGGTGAAGAAAATTTCTTTGCACAATGTGCTAATGTGGGGGACTCCACCTGTATTATGAGTTTGAATGGGAAGCAAATCAAGATGACAGAAGATCACAAGATAACGAATTATTCTGAAAGACTCAGAATCGAAGAGACAGGTGAACCGCTAAAAGAAGGGGAAACACGTCTATATGGTATAAATCTGGCAAGAATGCTTGGGGACAAATTCCTGAAACAGCAGGATACCCGGTTCAGTTCAGAACCTTACATAAGTGAAGTTGTGCATATTGATCAAGCAAGCAAAGCTTTTGCTATTCTAGCTAGTGATGGGCTGTGGGATGTCATCAGCGTGAAGAAGGCAATTCAGCTTGTGTTGCAGATGAGGGAGAAGTGCTATTCAGAGAGAGAGAATATAGCAGAAAAGACTGCTAGTTTGTTGTTGAATGAGGCTAAAACACTCAGAACAAAGGATAATACCTCTGTAATTTTCTTAGATTTTGATACCTTCAACAAATTCTCTTGTAAAGTTGAATCCTAG 1746 0.4336 MGTMLQTILTVLLLLMLLLIIIFLFFLFKPWRFFSSSRFLSSIKGELERPLVADEEDANASPLNQINELPRDYDLEGACYPSEAHFRSPRTHGQGLVHKQRFQTPSVPPTIPHCGDTLVVDVVSDPYTEDLDVGQTLKLSPAQLALFQKQGQPNFRNDRLQDLVQRNISDQRSCLTLEVISGPSRGLRCSVQSINSSRLPLTLGRVSPSDLLIKDSEVSGKHAMIKWNLDKMKWELVDMGSLNGTLLNSKQINHPDTESRNWGNPTSLANGDIITLGTTSKVMVHITSQTQHHIPFGVGMASDPMAMRRGGKRFAMEDVCYYQWPLSGLDQFGLFGVCDGHGGDGAAKSASKLFPEIIASILSDSLRRERVLSLRDASDILRDAFSQTEAHMNHHYEGCTATVLLVWTDGEENFFAQCANVGDSTCIMSLNGKQIKMTEDHKITNYSERLRIEETGEPLKEGETRLYGINLARMLGDKFLKQQDTRFSSEPYISEVVHIDQASKAFAILASDGLWDVISVKKAIQLVLQMREKCYSERENIAEKTASLLLNEAKTLRTKDNTSVIFLDFDTFNKFSCKVES* 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g00061 581 ProSiteProfiles PPM-type phosphatase domain profile. 297 569 IPR001932 -
Lapu2g00061 581 SUPERFAMILY SMAD/FHA domain 173 284 IPR008984 GO:0005515
Lapu2g00061 581 SUPERFAMILY PP2C-like 310 571 IPR036457 -
Lapu2g00061 581 PANTHER PROTEIN PHOSPHATASE 2C 272 566 IPR015655 GO:0004722|GO:0006470
Lapu2g00061 581 CDD PP2Cc 305 569 IPR001932 -
Lapu2g00061 581 SMART FHA_2 200 252 IPR000253 GO:0005515
Lapu2g00061 581 Pfam Protein phosphatase 2C 304 561 IPR001932 -
Lapu2g00061 581 CDD FHA_PP2C70-like 175 285 - -
Lapu2g00061 581 FunFam Protein phosphatase 2C 70 170 304 - -
Lapu2g00061 581 Coils Coil 572 581 - -
Lapu2g00061 581 Gene3D - 305 578 IPR036457 -
Lapu2g00061 581 SMART PP2C_4 291 567 IPR001932 -
Lapu2g00061 581 FunFam Protein phosphatase 2C 70 305 576 - -
Lapu2g00061 581 ProSiteProfiles Forkhead-associated (FHA) domain profile. 201 252 IPR000253 GO:0005515
Lapu2g00061 581 Pfam FHA domain 202 277 IPR000253 GO:0005515
Lapu2g00061 581 Gene3D - 169 304 - -
Lapu2g00061 581 ProSitePatterns PPM-type phosphatase domain signature. 334 342 IPR000222 GO:0043169
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g00061 Lapu-Chr2 547997 557071 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g00061 1 571 PP2C-type Phosphatase Gene Family AT5G19280 57.072 0.0 637
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g00061 K01090 - gmx:100170642 958.362