LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lapu2g00054	ATGGCAAGTACATTAATGCCATTATCATTTGTAGTAGTAATAGTAATTCTCTTACTTTCTTGTGGAATACTAATTCATGAGTGTGAGGGCCAAGAACCCAAGGCTTTGCCTCCAGCAGGGGAAACTTGTGACGGGATTTTCATTTCCTATGACTTTCTCACTCGAACCAAAGAATTCCCTCGGGTCAAGAATGTGACGGCACAATCTTGGGCCTTCAATTCCACCGCAACAGTTCTCAACACAAGCAAAGAAGTGGTTAAAGCTTGGAAGCTGTTCATAGAGTTTCAACATGACGAGATTCTAATCTCTGCCAGTGGAGGCAATATAGAAGATGGAACTGAGTTCCCCGCTTCGGTAGGAAATGGCACTACCTTTGTTGGAGCTTCTGAGCCAGACTTGGACAGCGCAATCAACACAGCTCAAGATTTAAACCAAATTCAAGCCATCATCCAACTTATTGGCACCCAGTTTGGAGTAAAGCCTCCTACGCCTCCTATGCCAAAAACCATAAAGTTGGTAAATGATGGTTACAAGTGCCCCAAACCAACTACCCGTAAGAGTTCCATGTATGCGTGCTGCAAAAAGGACCCTAAATTCAAGGCTCAACTTAAGAAGGAAAAATTCATGGCACGGCAAAAAGGGGATCTTCTCATATCCTATGACGTTACTCAAGTGTATGACAATAATTATATGGTTCAGGTGACGATGGAGAATAAACACTTTTTGGGACGGTTGGATCACTGGAACTTGACTTGGGAGTGGACGAGAGGGGAATTTATATACTCTATGAAAGGTGCCTTCACACGTGAGATAGAGTACTCAGGTTGCATCACTGGTGAGGCAGGAAAGTATTACAAGGACATGGATTTCTCTCAAGTGGTTAACTGTCAGAAGAATCCTATAGTGAGTGACTTGCCTCCAGAGAAATATAACGACACTGAACTTGGAAAGATACCTAACTGTTGCAAAAACGGAACTCTTTTACCTATCATTATGGACCCTAGCAAATCCAAATCTGTTTTTACAATGCAAGTGTTCAAAATTCCACCCGAGTTAAATAAAACTGCAATTTTCCCTCCAGAGAAATGGAAGATAACGGGCATTCTGAACCCGAACTACAAATGTGGGTCACCTAGAAGAGTGGAGCCCGCTCGATATCCAGACCCCAGGGGACTTGAAGCAACGGTTATTACCATTTCAAGTTGGCAAATAGTCTGCAACATCACTAAGCCAACCAAAAGGAGCAGTCGCTGTTGTGTTTCTTTCTCTTCTTATTACAATGAGTCTGTGATCCCGTGCAACACATGTGCTTGTGGCTGTGATACTGATAATACCAAAAAATGCAATCCCAATTCACCAGCAATGCTTCTCCCCCCAGAGGCTCTTCTTGTACCCTTTGACAATAGGTCACAAAAGACAGTTGCTTGGGCCAAACTGAAGCATTTTACTATCCCCAAAAGATTACCCTGTGCTGACAACTGTGGAGTCAGCATAAACTGGCATGTGGCTTCCGACTACAAAGGTGGGTGGAGTGCCCGGATCACTCTGTTCAACTGGATGACTACCAGTTTTGACAATTGGTTCACTGCACTCCAATTCAAGAAGACACCTCGAGGTTACGAAAAAGCATATTCTTTTAATGGAACATCCATTCCAACGCTCAACCATACTATTTTCTTGCAAGGAATACTAGGATCAAACTATCTGATTGCCTTAGACAATAGAACAAACCCACATGTGCCTGGAAAACAACAGTCTGTTATTTCATTTACCAAGAAGTATTCACCAAATATCCGAATTGCAAAGGGAGATGGGTTCCCTTCAAAGGTCTTTTTTAACGGTGAAGAGTGTTCCCTTCCTACCCGATTCCCTGTCAGAAATGGAAACCAACCTAATGTAGATTTAGCATACCAACTATTGCTTTTCGCTTTAGCTTTTACAATCACTCAACTAGTGTATTAA	1962	0.4251	MASTLMPLSFVVVIVILLLSCGILIHECEGQEPKALPPAGETCDGIFISYDFLTRTKEFPRVKNVTAQSWAFNSTATVLNTSKEVVKAWKLFIEFQHDEILISASGGNIEDGTEFPASVGNGTTFVGASEPDLDSAINTAQDLNQIQAIIQLIGTQFGVKPPTPPMPKTIKLVNDGYKCPKPTTRKSSMYACCKKDPKFKAQLKKEKFMARQKGDLLISYDVTQVYDNNYMVQVTMENKHFLGRLDHWNLTWEWTRGEFIYSMKGAFTREIEYSGCITGEAGKYYKDMDFSQVVNCQKNPIVSDLPPEKYNDTELGKIPNCCKNGTLLPIIMDPSKSKSVFTMQVFKIPPELNKTAIFPPEKWKITGILNPNYKCGSPRRVEPARYPDPRGLEATVITISSWQIVCNITKPTKRSSRCCVSFSSYYNESVIPCNTCACGCDTDNTKKCNPNSPAMLLPPEALLVPFDNRSQKTVAWAKLKHFTIPKRLPCADNCGVSINWHVASDYKGGWSARITLFNWMTTSFDNWFTALQFKKTPRGYEKAYSFNGTSIPTLNHTIFLQGILGSNYLIALDNRTNPHVPGKQQSVISFTKKYSPNIRIAKGDGFPSKVFFNGEECSLPTRFPVRNGNQPNVDLAYQLLLFALAFTITQLVY*	654

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lapu2g00054	653	Pfam	COBRA-like protein	230	409	IPR006918	GO:0010215\|GO:0016020
	Lapu2g00054	653	PANTHER	COBRA-LIKE PROTEIN 7	10	648	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lapu2g00054	Lapu-Chr2	472462	474693	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lapu2g00054	10	645	COBRA Gene Family	AT3G20580	54.714	0.0	725

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lapu2g00054	-		-	gmx:100799716	1085.86