Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g00044 ATGATTACAGGAATTACAGTTGTGGTAGGCTTGGTCATAGTGTTTTTCATTTTCGGACTGTACCTTGTGAGGAATAAAAGGCATCGGCATAGTAAGAATGAAATAGACAATCATAACATGAATCTTGGATCTCTTCGAGTGGCCACCAATAATTTTTCTGATTTGAATAAGCTTGGACAAGGTGGCTTTGGCCCTGTTTACAAGGGGAAACTTTGTGATGGCCAAGAAGTAGCAATCAAGAGGTTGTCAACTTGCTCCGAACAAGGCTCGGAGGAATTCATAAACGAGGTTCTTCTGATAATGAAACTTCAACACAAAAACCTTGTAAAGCTTCTTGGATTTTGTGTAGATGGAGAGGAGAAACTTCTTGTGTATGAATTTTTAACCAATGGTAGTCTTGATGTTGTACTCTTTGATTCACGACTGAAAGTGATTCATAGAGACCTAAAAGCAAGTAATGTATTGTTAGACTGTGACATGAATCCAAAGATCTCAGACTTTGGAATGGCAAGGATATTTGCAGGAAATGAAGGTGAAGCTAACACTGCTACAATAGTTGGCACATATGGATATATGGCTCCAGAGTATGCAATGGAGGGATTATATTCAATAAAATCTGATGTGTTTGGGTTTGGTGTCCTATTGCTTGAGATCATCACAGGGAAACGCAACGCGGATTTCTATCACTCTAAAAACACTCCTGGCCTTCTATCATATGCATGGAGTGTATGGAATGAGGGAAAGGGGATAGAACTAAGTGATCCCTTGTGTGATTCATGCCCTGGAGATGAGTTTTTGAGATACATGCAGATTGGACTGCTATGTGTTCAAGAGGATGCATATGATAGGCCAACCATGTCTTCTGTTGTGACGATGTTGAAGAATGAATCAGCTACGCTTGGCCATCCAGAAAAACCACCTTTCTCAGTTGGCAGATTCAATGCGAGTGAGCCAGATTCCCAAGAATGCTCACTCAATTTCTTAACCGTGTCAGATATATTGCCCCACTGA 1011 0.4055 MITGITVVVGLVIVFFIFGLYLVRNKRHRHSKNEIDNHNMNLGSLRVATNNFSDLNKLGQGGFGPVYKGKLCDGQEVAIKRLSTCSEQGSEEFINEVLLIMKLQHKNLVKLLGFCVDGEEKLLVYEFLTNGSLDVVLFDSRLKVIHRDLKASNVLLDCDMNPKISDFGMARIFAGNEGEANTATIVGTYGYMAPEYAMEGLYSIKSDVFGFGVLLLEIITGKRNADFYHSKNTPGLLSYAWSVWNEGKGIELSDPLCDSCPGDEFLRYMQIGLLCVQEDAYDRPTMSSVVTMLKNESATLGHPEKPPFSVGRFNASEPDSQECSLNFLTVSDILPH* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g00044 336 FunFam Cysteine-rich receptor-like protein kinase 10 23 127 - -
Lapu2g00044 336 SUPERFAMILY Protein kinase-like (PK-like) 40 310 IPR011009 -
Lapu2g00044 336 SMART serkin_6 52 293 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu2g00044 336 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 173 298 - -
Lapu2g00044 336 Pfam Protein tyrosine and serine/threonine kinase 142 292 IPR001245 GO:0004672|GO:0006468
Lapu2g00044 336 Pfam Protein tyrosine and serine/threonine kinase 56 138 IPR001245 GO:0004672|GO:0006468
Lapu2g00044 336 ProSitePatterns Serine/Threonine protein kinases active-site signature. 144 156 IPR008271 GO:0004672|GO:0006468
Lapu2g00044 336 Gene3D Transferase(Phosphotransferase) domain 1 128 303 - -
Lapu2g00044 336 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 6 331 - -
Lapu2g00044 336 Gene3D Phosphorylase Kinase; domain 1 20 127 - -
Lapu2g00044 336 ProSiteProfiles Protein kinase domain profile. 52 305 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g00044 Lapu-Chr2 406302 407939 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g00044 32 326 Receptor kinase-like Gene Family AT4G23150 47.546 1.40e-102 313
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lapu2g00044 PK_Tyr_Ser-Thr 2.6e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g00044 - - pvu:PHAVU_002G049300g 609.757