Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lapu2g00035 | ATGGCTTACGCTGCAATGAAGCCCACTAAACCCGGCTTGGAGGACACCGAGGAGCAGATCCATAAGATCAGGATCACTCTTTCCTCTAAGAACGTCAAGAATCTCGAGAAGGTTTGCGCCGATCTGGTTCGCGGTGCCAGGGATAAGCGCCTCAGGGTGAAGGGACCTGTTAGGATGCCAACCAAAGTTCTTAACATCACCACCAGGAAATCCCCCTGTGGTGAAGGCACCAACACATGGGACAGATTTGAGCTGCGTGTGCACAAGAGAGTCATTGACCTCTACAGTTCCCCTGATGTGGTCAAGCAGATAACCTCAATCACAATTGAACCTGGTGTAGAGGTCGAGGTGACCATTGCTGATGCTTGA | 369 | 0.5122 | MAYAAMKPTKPGLEDTEEQIHKIRITLSSKNVKNLEKVCADLVRGARDKRLRVKGPVRMPTKVLNITTRKSPCGEGTNTWDRFELRVHKRVIDLYSSPDVVKQITSITIEPGVEVEVTIADA* | 123 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lapu2g00035 | 122 | NCBIfam | 30S ribosomal protein S10 | 21 | 119 | IPR005729 | GO:0003735|GO:0006412|GO:0015935 | |
Lapu2g00035 | 122 | PANTHER | 30S RIBOSOMAL PROTEIN S10 FAMILY MEMBER | 15 | 121 | IPR001848 | GO:0003735|GO:0005840|GO:0006412 | |
Lapu2g00035 | 122 | SUPERFAMILY | Ribosomal protein S10 | 22 | 119 | IPR036838 | - | |
Lapu2g00035 | 122 | FunFam | 40S ribosomal protein S20 | 7 | 121 | - | - | |
Lapu2g00035 | 122 | Gene3D | Ribosomal protein S10 domain | 7 | 121 | IPR036838 | - | |
Lapu2g00035 | 122 | Hamap | 30S ribosomal protein S10 [rpsJ]. | 20 | 119 | IPR001848 | GO:0003735|GO:0005840|GO:0006412 | |
Lapu2g00035 | 122 | SMART | Ribosomal_S10_2 | 24 | 118 | IPR027486 | - | |
Lapu2g00035 | 122 | PRINTS | Ribosomal protein S10 family signature | 79 | 93 | IPR001848 | GO:0003735|GO:0005840|GO:0006412 | |
Lapu2g00035 | 122 | PRINTS | Ribosomal protein S10 family signature | 22 | 35 | IPR001848 | GO:0003735|GO:0005840|GO:0006412 | |
Lapu2g00035 | 122 | PRINTS | Ribosomal protein S10 family signature | 57 | 72 | IPR001848 | GO:0003735|GO:0005840|GO:0006412 | |
Lapu2g00035 | 122 | Pfam | Ribosomal protein S10p/S20e | 24 | 118 | IPR027486 | - | |
Lapu2g00035 | 122 | ProSitePatterns | Ribosomal protein S10 signature. | 46 | 61 | IPR018268 | GO:0003723|GO:0003735|GO:0005840|GO:0006412 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lapu2g00035 | Lapu-Chr2 | 321484 | 323225 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lapu2g00035 | 1 | 122 | Cytoplasmic Ribosomal Protein Gene Family | AT3G47370 | 90.164 | 3.87e-78 | 224 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lapu2g00035 | K02969 | - | gmx:100813093 | 237.269 |