Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g00034 ATGAGGGGAGGAGAGGAGAGACAGCCTGTGACAGGGATTCGGAAGAAGGGAAGCGGAGTGAGGCAATGGCTGGTGCTCGACGGGAAAGGGGAGACGGAGGTGGTGGAGGCCGGCAAGCACGCCATCATGAGGCGCACCGGCCTCCCCGCCCGTGACCTCCGCATATTGGACCCTCTCCTCTCCTACCCTTCCACCCTTCTCGGCCGTGAGAAGGCCATCGTCATCAACTTGGAGCACATCAAGGCCATCATCACCGCCCAAGAGGTTCTCCTCCTCAACTCACGTGACCCCTCCGTCACCCCCTTCGTCCACGAGCTCCAGGCCAGGATCCTCCGCCACCACCAGGCCTCCTGCTCTTCCAAACACCACGCCCACCACCCCGACCCCGACCCCGACCCCGACCCCGACCCCGACCCCGACCGCGACCCCGACGCCATCAAGATTCTCCCCTTCGAGTTCGTATCCCTCGAGGCCTGCCTTGAAGCCGCCTGTAGCGTATTGGAGAACGAGGCGAAGACGTTGGAGCAGGAGGCTCATCCCGCCTTGGACAAGCTCACATCCAAGATCAGTACTCTCAATTTGGAACGCGTTCGTCAAATTAAGAGCCGATTAGTCGCCATCACTGGTCGTGTTCAGAAGGTGAGGGATGAATTGGAGCACTTGCTGGACGACGACGAAGATATGGCTGAGATGTATCTGACTGAAAAGTTAGCCGAACAGCAGTTGGAGCAAAGCTCTTCCGCATCATCTATGAATGACCAAGACGACGACGATATAGACGACAGGACCGCTCCTGAAATATCCTTTGATACTGGGGGCCCCGCTGTGGGTTTCGAGGATCACCACAATGTTTACAATGTTCTTGGTAGGGACAGCCATGGAACCCGTGGTAGCACCTACAGTGCCGTCACCAAGCAACTTGATGTCGAGGAGCTTGAAATGCTTTTGGAGGCTTACTTTGTGCAGATCGATGGCACCTTGAACAAACTCTCTACGCTGAGGGAGTATGTTGACGACACGGAGGATTACATCAACATCATGCTGGATGACAAACAGAATCATCTCCTCCAAATGGGAGTCATGTTGACCACAGCAACTCTGGTAGTGAGTGCCTTTGTTGTTGTGGCCGGAATTTTCGGCATGAATATTCACATTGAGCTATTTGATCCCGATAAAGCTGGGATGACAGAATTCCTCTGGACTGTTGGTGGTAGCACTGCAGGGACTATTTTCTTGTATGTAGTTGCCATTGCCTGGTGTAAGCACAAACGCTTGCTAGAGTAA 1284 0.546 MRGGEERQPVTGIRKKGSGVRQWLVLDGKGETEVVEAGKHAIMRRTGLPARDLRILDPLLSYPSTLLGREKAIVINLEHIKAIITAQEVLLLNSRDPSVTPFVHELQARILRHHQASCSSKHHAHHPDPDPDPDPDPDPDRDPDAIKILPFEFVSLEACLEAACSVLENEAKTLEQEAHPALDKLTSKISTLNLERVRQIKSRLVAITGRVQKVRDELEHLLDDDEDMAEMYLTEKLAEQQLEQSSSASSMNDQDDDDIDDRTAPEISFDTGGPAVGFEDHHNVYNVLGRDSHGTRGSTYSAVTKQLDVEELEMLLEAYFVQIDGTLNKLSTLREYVDDTEDYINIMLDDKQNHLLQMGVMLTTATLVVSAFVVVAGIFGMNIHIELFDPDKAGMTEFLWTVGGSTAGTIFLYVVAIAWCKHKRLLE* 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g00034 427 MobiDBLite consensus disorder prediction 240 266 - -
Lapu2g00034 427 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 10 426 IPR039204 -
Lapu2g00034 427 MobiDBLite consensus disorder prediction 115 144 - -
Lapu2g00034 427 FunFam Magnesium transporter MRS2-1 11 94 - -
Lapu2g00034 427 CDD Mrs2_Mfm1p-like 23 425 IPR039204 -
Lapu2g00034 427 Pfam CorA-like Mg2+ transporter protein 311 413 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Lapu2g00034 427 Coils Coil 157 177 - -
Lapu2g00034 427 Gene3D - 10 94 - -
Lapu2g00034 427 Gene3D Magnesium transport protein CorA, transmembrane region 98 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g00034 Lapu-Chr2 315926 320180 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g00034 23 427 MRS2 Gene Family AT3G19640 66.364 0.0 534
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g00034 - - gmx:100819578 630.172