Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g00025 ATGGGGCACTCCAATGTGTGGAACTCTCATCCCAAGAACTATGGACCTGGTTCTCGCACCTGCCGCGTGTGTGGGAACCCTCATGGATTGATTAGGAAGTATGGGCTTATGTGTTGCAGGCAGTGTTTCCGTAGCAATGCCAAGGAAATTGGCTTCATTAAGTGTTCATCTTCCCCACCCGTTTTGGATTCTGGCATCAGTGATGATAATGTGGGGATGATTTCATTGTTTGAAGAATTTTAA 243 0.4609 MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKCSSSPPVLDSGISDDNVGMISLFEEF* 81
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g00025 80 Hamap 30S ribosomal protein S14 type Z [rpsZ]. 2 57 IPR023676 GO:0003723|GO:0003735|GO:0006412|GO:0015935
Lapu2g00025 80 PANTHER 40S RIBOSOMAL PROTEIN S29 1 55 IPR039744 GO:0003735|GO:0008270
Lapu2g00025 80 Pfam Ribosomal protein S14p/S29e 7 56 IPR001209 GO:0003735|GO:0005840|GO:0006412
Lapu2g00025 80 Gene3D 30s Ribosomal Protein S14; Chain N 1 56 IPR043140 -
Lapu2g00025 80 FunFam 40S ribosomal protein S29 1 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g00025 Lapu-Chr2 264310 265628 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g00025 1 54 Cytoplasmic Ribosomal Protein Gene Family AT4G33865 92.593 3.19e-33 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g00025 K02980 - gmx:100790389 126.716