Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g02195 ATGTCCCTTCCTTTTTATTTCTCGCTCTTTTTTATTTTTTCTCTTTCATTTATTATTCCGCTTCCTACGCTGGCCGCCAACGACACCGCTCCCTGTCCCTTGAACATCACCGTGCTTCGCGTGGTGGGCGGCGGCGCCCGTCCCTCCTTCGACTCCGGCACGCAGTGCCATTACATCCTGCAGGCGCTCCACCTCCTCCAGGCGGACTACCTCCGCCGCAGCAACCTCTTCGTGCCGCCTCTCAACGCCTCCGAGTCCTGCTGGGTCTCCTTCCAGTCCTTCATCAACGAATTCGACCCAAACATCGATATCCGCTCCTCCTGCGGCCTCGAAACCGCGTGGATCTCCCAAGGCTGCATGAACATCACCACCAAACAGCAGTTCGAAGCCACCGTCCCCCCCGCCGCAATTCAGGCCGTCCAAGGCAACTGCAACCAGTCGCTCGCAAACAACGCCCCCTGCGCCCTCTGCACCACCAAACTCTCCACCCTTCTCTCCTACTTGACCGGCACAACCATCGGGAACGTCTCCGATTGCCGAGCCTATACCTCCATCTACGCCGCCTCTCTCTCTGACCAATACGGTGCCACTGACCCCGGAACCGCTAAGTGCCTCTTCGGCCTCGATTTTTCCACCCCCGGTTCCAGCGGTAAGCGCCGAACCATTATTATCGTCGTTTCCGTTTTCTGTTTTCTGGCTTTGGTTGTTTTTGCCGGGGTTTGGACTTATGCTAGATTGAAGAAGAGGAATGAGTTTGCGGGAGAGAAGGGTGTTGGAACATCAGAACTTGGTTTGGGTTTGGGTTCTGGGTTGGATTCCATAAACCAGAGTACCACTTTGATTAGGTTCACTTTTGATGAGATTAAAAAGGCTACTAGGAACTTCTCCAGGGATAACATGATCGGGAGTGGGGGTTATGGGAATGTTTATAAAGGGGTGTTGCTGGATGGTAGTCCAGTTGCATTTAAAAGGTTCAAGAATTGTTCTGTTGCCGGGGATGCTAGCTTCACTCACGAAGTTGAGGTTATTGCCAGTGTTCGCCATGTGAATCTTGTTACCTTAAGAGGTTATTGTACTGCCACGACCAATTTAGAGGGGCACCAGAGGATTATTGTCACTGATTTGATGGAAAATGGGAGTCTTTATGATCATTTATTTGGTTCTTCTAAGAAGAATCTCAGTTGGCCTATTCGTCAAAAGATTGCTCTAGGGACTGCTAGAGGGTTGGCTTATTTGCATTATGGGGCTCAACCTTCCATCATTCATAGGGATATTAAAGCTAGTAACATACTTCTGGACCATAAGTTTGAAGCCAAGGTGGCGGATTTCGGGTTGGCCAAGTTCAACCCTGAGGGAATGACGCATATGAGCACTAGAGTGGCTGGGACTATGGGGTATGTTGCTCCTGAGTATGCATTGTATGGACAGTTGACAGAGAGAAGTGATGTGTTCAGTTATGGTGTTGTGCTTCTTGAGCTTTTGAGTGGGAAAAAGGCCCTTCAAACCAACGATGATGGGCAACCCTCCGCACTCACTGACTTTGCTTGGTCGTTGGTTAGAAACGGTAGTGCTCTGGATGTTGTTGAAGATGGCATTCCCGAACCTGGTCCACCAGAAGTTCTAGAGAAGTATGTGTTGATTGCTGTGTTGTGTTCTCATCCACAGCTATATGCTAGACCTACAATGGATCAGGTTGTTAAAATGCTGGAGACAGATGAATCGGTTCCCTCGTTAATGGAAAGGCCAATTCCTTTTATTGCTGGGAGAATTGACATTGAGAAATCTGCGCTGAGTAACTCGGGTCAGCTCTGCAGTCCAACCGGTTATCAAGCATATACATTACAAAGTCGCCGCAAATCTCTTTCTAAAGAAGAAGAGGAAGAAGAAGAAGGAAGTTCAGTGGCTGATACTGTTACCACAGAATGA 1926 0.4922 MSLPFYFSLFFIFSLSFIIPLPTLAANDTAPCPLNITVLRVVGGGARPSFDSGTQCHYILQALHLLQADYLRRSNLFVPPLNASESCWVSFQSFINEFDPNIDIRSSCGLETAWISQGCMNITTKQQFEATVPPAAIQAVQGNCNQSLANNAPCALCTTKLSTLLSYLTGTTIGNVSDCRAYTSIYAASLSDQYGATDPGTAKCLFGLDFSTPGSSGKRRTIIIVVSVFCFLALVVFAGVWTYARLKKRNEFAGEKGVGTSELGLGLGSGLDSINQSTTLIRFTFDEIKKATRNFSRDNMIGSGGYGNVYKGVLLDGSPVAFKRFKNCSVAGDASFTHEVEVIASVRHVNLVTLRGYCTATTNLEGHQRIIVTDLMENGSLYDHLFGSSKKNLSWPIRQKIALGTARGLAYLHYGAQPSIIHRDIKASNILLDHKFEAKVADFGLAKFNPEGMTHMSTRVAGTMGYVAPEYALYGQLTERSDVFSYGVVLLELLSGKKALQTNDDGQPSALTDFAWSLVRNGSALDVVEDGIPEPGPPEVLEKYVLIAVLCSHPQLYARPTMDQVVKMLETDESVPSLMERPIPFIAGRIDIEKSALSNSGQLCSPTGYQAYTLQSRRKSLSKEEEEEEEGSSVADTVTTE* 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g02195 641 Gene3D Transferase(Phosphotransferase) domain 1 376 579 - -
Lapu1g02195 641 Gene3D Phosphorylase Kinase; domain 1 270 374 - -
Lapu1g02195 641 SUPERFAMILY Protein kinase-like (PK-like) 278 582 IPR011009 -
Lapu1g02195 641 Pfam Protein kinase domain 296 510 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu1g02195 641 ProSitePatterns Serine/Threonine protein kinases active-site signature. 420 432 IPR008271 GO:0004672|GO:0006468
Lapu1g02195 641 ProSiteProfiles Protein kinase domain profile. 295 586 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu1g02195 641 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 376 577 - -
Lapu1g02195 641 ProSitePatterns Protein kinases ATP-binding region signature. 301 323 IPR017441 GO:0005524
Lapu1g02195 641 MobiDBLite consensus disorder prediction 615 641 - -
Lapu1g02195 641 CDD STKc_IRAK 301 570 - -
Lapu1g02195 641 SMART serkin_6 295 586 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu1g02195 641 Pfam SPARK 28 179 IPR043891 -
Lapu1g02195 641 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 260 374 - -
Lapu1g02195 641 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 155 626 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g02195 Lapu-Chr1 36522512 36524686 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g02195 9 614 Receptor kinase-like Gene Family AT2G48010 60.294 0.0 746
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Lapu1g02195 Pkinase 1.7e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g02195 - - gmx:100819453 1054.66