Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g02194 ATGCCACTGTTCCCGATCTTTGTCACCATCTTCCTCACTCTCCCAACCCTTTCCCTCTCCGTTCCCTGTCCCCTCAACATCACCCTCCTCCATTCCAGACCTTCCTCGGACTACAAGACACGGTGTCGTTACATCCACCAATCCCTTCGTATTCTTCAATCCGATTACCTCCGCCGCACCGTGCTGCATCTTGTGCTCTCTGCACCAACGCTTTGCGTAACTTGGATTCGCACCTCGCGGACAATACCGCTGATTGCAAGGCTATTGCTTCTATATATGCTGGTTCCCTCTCTGACCTGCAAGACCCCGGAACTGTTGAGTGTTTGTTCAGCCTTGATTCTTCTTCGGCTTCAACTGAGTACTACCTTGATTAGGTTCACTTTTGATGAGATTAAAAAGGCTACTAGGAATTTCGCCGGTGATAACATAATTGGGAAGGGGGGTTATGGGAATGTTTATAGAGGGATGCTGTTTGATGGGACTCAGGTTGCATTGAAAAGGTTTAAGAATTGTTCTGTTGCTGGGGATGCCAGCTTCACTCATGAAGTTGAGGTTATTGCGAGCGTTAGGCATGTGAACCTTGTTGCCTTGAGAGGATATTGTACTGCCACAACTAATTTAGAGGGCCACCAGAGGATTATTGTCACTGATTTGATGGAGAATGGGAGCGTTTATGATCATTTATTTGGTTCTGCTAAGCAGAAACTCAGTTGGCCAATTCGTCAAAAGATTGCTCTAGGAACTGCTAGGGGGTTGGCTTATTTGCACTATGGGGCTCAACCTTCCATCATCCATAGGGATATTAAGGCTAGTAACATACTTCTGGACCGCAAGTTTGAAGCCAAGGTAGCGGATTTTGGGTTAGCGAAGTTCAACCCTGAGGGAATGACGCATATGAGCACTAGAGTGGCTGGAACTAAGGGGTATGTTGCACCTGAGTATGCTTTGTATGGACAGTTGACAGAGAGAAGTGACGTGTTCAGTTTTGGGGTTGTGCTTCTTGAGCTTTTGAGTGGGAAAAGGGCTCTTGAAATGGACACTGATGGGCAACCCTATGCAGTCACTGACTTTGCTTGGTCATTGGTTAGGAATGGTAAAGCTTTGGACGTTATTGAAGATGGTATGCCAGAACTTGGTACCATAGAAATTCTTGAAAAGTATGTATTGGTTGGTGTACTATGTTGTCATCCACAACTGTATGCTAGGCCAACAATGGACCAGGTTGTTAAAATGCTAGAGACAGATGAATCAGTGTCCTCATTAATTGAACAGCCAATCTCTTGTATTACTACTGAGAGGATTGATACTGAGAAATCTGTGTAG 1323 0.4543 MPLFPIFVTIFLTLPTLSLSVPCPLNITLLHSRPSSDYKTRCRYIHQSLRILQSDYLRRTVLHLVLSAPTLCVTWIRTSRTIPLIARLLLLYMLVPSLTCKTPELLSVCSALILLRLQLSTTLIRFTFDEIKKATRNFAGDNIIGKGGYGNVYRGMLFDGTQVALKRFKNCSVAGDASFTHEVEVIASVRHVNLVALRGYCTATTNLEGHQRIIVTDLMENGSVYDHLFGSAKQKLSWPIRQKIALGTARGLAYLHYGAQPSIIHRDIKASNILLDRKFEAKVADFGLAKFNPEGMTHMSTRVAGTKGYVAPEYALYGQLTERSDVFSFGVVLLELLSGKRALEMDTDGQPYAVTDFAWSLVRNGKALDVIEDGMPELGTIEILEKYVLVGVLCCHPQLYARPTMDQVVKMLETDESVSSLIEQPISCITTERIDTEKSV* 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g02194 440 SMART serkin_6 138 427 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu1g02194 440 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 100 426 - -
Lapu1g02194 440 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 109 217 - -
Lapu1g02194 440 ProSitePatterns Serine/Threonine protein kinases active-site signature. 263 275 IPR008271 GO:0004672|GO:0006468
Lapu1g02194 440 ProSitePatterns Protein kinases ATP-binding region signature. 144 166 IPR017441 GO:0005524
Lapu1g02194 440 ProSiteProfiles Protein kinase domain profile. 138 440 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu1g02194 440 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 219 420 - -
Lapu1g02194 440 Gene3D Phosphorylase Kinase; domain 1 111 217 - -
Lapu1g02194 440 CDD STKc_IRAK 144 413 - -
Lapu1g02194 440 Gene3D Transferase(Phosphotransferase) domain 1 219 427 - -
Lapu1g02194 440 Pfam Protein kinase domain 142 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu1g02194 440 SUPERFAMILY Protein kinase-like (PK-like) 119 413 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g02194 Lapu-Chr1 36513499 36515729 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g02194 120 435 Receptor kinase-like Gene Family AT2G48010 74.528 2.85e-176 505
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Lapu1g02194 Pkinase 5.7e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g02194 - - vun:114194863 590.112