Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g02173 ATGACCATGTCAAGAGTGATGTGTAGACCAACACAGCCTCTGAGAAACGTTCCTTCCAGTGGACAAAGCCAGATGATGAGGCCAAAAGAGAAGGTGGTGTTGGTGATGGGAGCAACGGGGAGCGGGAAAACGAGGTTGTCGGTGGACTTAGCAACATGTTTTCCCTCAGAAATCATAAACTCTGACAAAATGCAAGTGTACGAAGGGCTCGAGATTGTGACGAACAAGGCCACCAAAGAGGAGCAGCGTGGGATCCCACATCACCTTCTGGGGACGCAGAACCCCGACACGGAGTTCACGGCCTCGGACTTCTGCGACGTGGCCTCACGCGCCATCGAGTCTATCACGCGCCGCGACAAGGTTCCGATAGTAGTGGGAGGGTCCAACTCGTACATGGAGGCGCTGGTGGAGAGGTTCGGGCCGAGGTTCGAGTGGTGCTTTCTGTGGGTGGACGTATCCGTGCCTGTTCTCCATACCTACGTGGCGCAGCGCGTGGACCACATGCTCCGTGGCGGAATGGTGAACGAGTTGAGACCGTTTTTCAACGTGAACGGGGATTACGCGCGTGGGATAAGGAAAGCCATTGGGGTTTCTGAATTCCACTCGTACTTCCGGCGGGAAGCGGCGGCGAGCGGCGAGGCTAGGATGAGGCTGCTGCAGGAGGCGGTGAGGGACGTGAAGAGGAACACGTGTCACTTGGCATGCAAGCAACTTGGGAGAATCCACATGCTCCGAAGTGTTAAGAGGTGGAAGGTCCACCGCGTTTGCGCCACCCCTGTGTTTCAGAAACGTGGCCACGACGCCAATGAGGCTTGGAACAACATGGTGGCGCAACCCTGTGCCTCCATTGTTTCTCAGTTTCTCTATTCTTCTTCTTCTTCTTCCAATTCTGCTTCTGGGAGAGTCGCACCTTCTATGCAACCAAACTAA 930 0.5527 MTMSRVMCRPTQPLRNVPSSGQSQMMRPKEKVVLVMGATGSGKTRLSVDLATCFPSEIINSDKMQVYEGLEIVTNKATKEEQRGIPHHLLGTQNPDTEFTASDFCDVASRAIESITRRDKVPIVVGGSNSYMEALVERFGPRFEWCFLWVDVSVPVLHTYVAQRVDHMLRGGMVNELRPFFNVNGDYARGIRKAIGVSEFHSYFRREAAASGEARMRLLQEAVRDVKRNTCHLACKQLGRIHMLRSVKRWKVHRVCATPVFQKRGHDANEAWNNMVAQPCASIVSQFLYSSSSSSNSASGRVAPSMQPN* 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g02173 309 MobiDBLite consensus disorder prediction 1 26 - -
Lapu1g02173 309 Gene3D - 29 288 IPR027417 -
Lapu1g02173 309 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 154 252 - -
Lapu1g02173 309 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 32 151 IPR027417 -
Lapu1g02173 309 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 29 288 IPR039657 -
Lapu1g02173 309 Pfam IPP transferase 65 141 - -
Lapu1g02173 309 Pfam IPP transferase 142 238 - -
Lapu1g02173 309 FunFam Adenylate isopentenyltransferase 5, chloroplastic 154 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g02173 Lapu-Chr1 36239116 36240045 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g02173 142 301 C2H2 Transcription Factor Family AT2G27760 28.191 5.04e-19 85.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g02173 K10760 - gmx:100777757 515.383