Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g02142 ATGCCAAACATGCCGCCAACCGGAGAAAGAAGAAGAAAAAGAAACAACCTTAGCCGCTTGAACTTGAACCTATGTTTCTCAATTCCCATGCAACCGTTCACACCACAATCTCCGCCTACAATCCCCGCCGACACCTCCTCAACCGTTGTTAAAAATCAAAATCAAAACCCTCCATCACCACCCGCCGCGTCATCATCCCCGATCAACAACTTCAACTACGATCCTACTAACCCATTCCCGAGCCTCGGACCCGAACCCGAACCTGCTGACCTTGCCTCCGCCTTCGTCTCCCAACGCTTCTTCTTTACCTGCCCCGGTCGCTCCAACTCCATCGTCGAATCCACGATCACCGACACCGATTACGCCAGCTCGTCATCCTCGCCGGGAAAACCCATCGCCACCGTCGACGTGAAGGCGAAAGCTGCGCTCGACGGCAGCGTTGCAGTGGAGACGTACTCGCCGGACCCCTACGTCGACTTCCGGCTCTCCATGGAGGAGATGGTGGCGGCGCGTCCCGAGTTGATCGACGTGGAGGCCAATTGGAAAGCATTGCACGAGCTTCTTCTCTGCTACCTCGCGCTCAACCCGAAGAGCACGCACAAGTTCATCCTCTGCGCTTTTTCTGATCTTCTTCTCAGCCTCATCTCGCTCTCTTCTGTGCCGCCGCAGGATCCCGGTTCTGGCGACGTCGCCGTCGGTGGCGATGAATGTTCGAATTAG 720 0.5625 MPNMPPTGERRRKRNNLSRLNLNLCFSIPMQPFTPQSPPTIPADTSSTVVKNQNQNPPSPPAASSSPINNFNYDPTNPFPSLGPEPEPADLASAFVSQRFFFTCPGRSNSIVESTITDTDYASSSSSPGKPIATVDVKAKAALDGSVAVETYSPDPYVDFRLSMEEMVAARPELIDVEANWKALHELLLCYLALNPKSTHKFILCAFSDLLLSLISLSSVPPQDPGSGDVAVGGDECSN* 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g02142 239 MobiDBLite consensus disorder prediction 31 86 - -
Lapu1g02142 239 MobiDBLite consensus disorder prediction 40 77 - -
Lapu1g02142 239 Pfam Transcriptional repressor, ovate 153 214 IPR006458 -
Lapu1g02142 239 NCBIfam uncharacterized plant-specific domain TIGR01568 147 215 IPR006458 -
Lapu1g02142 239 ProSiteProfiles OVATE domain profile. 149 213 IPR006458 -
Lapu1g02142 239 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 50 214 IPR038933 GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g02142 Lapu-Chr1 35578861 35579589 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Lapu1g02142 Ovate 7.2e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g02142 - - pvu:PHAVU_001G153000g 348.206
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g02142 1 35578861 35579589 Lapu1g02142 1 35578861 35579589 ECH
Lapu1g02142 1 35578861 35579589 Lapu7g00242 7 2757768 2758913 PCT