Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g02131 ATGGGTAACGCCGACTATGCATATCCGAACGTGGAGTGTGTGCACCGAGTGGCCATTCCACCCCCTCAACCATTCTTCAAGTCCCTCAAGTACTCTTTGAAAGAGACCTTTTTTCCAGATGACCCGTTTAGGAAGTTCAAGAACCAAACACCCTCTACCAAGTTCGTCCTTGGACTTCAGTACTTCTTCCCCATCTTTGAGTGGGCACCCAAATACACCCTCCAATTCTTGAAATCAGACCTCATCTCTGGCATCACCATTGCCAGTTTGGCCATTCCTCAAGGCATCAGCTACGCCAAGCTCGCCAACCTCCCTCCAATTCTTGGACTTTATTCGAGCTTTATACCGCCGTTGATCTATGCAATGATGGGCAGCTCAAGGGATTTGGCAGTGGGAACTGTGGCGGTTGGATCACTTCTGATGGCTTCCATGTTGGGTCGAGTGGTGAACTACATCGAGAATCCAAACCTTTTTCTCCACCTAGCTTTCACTGCTACATTCTTTGCTGGAGTTTTGCAGGCATCACTGGGCCTCTTCAGGTTAGGGTTTATCGTGGATTTTCTGTCACATGCAACCATAGTAGGGTTCATGGGGGGAGCAGCCACAGTGGTTTGTCTACAACAGCTAAAATCAATTCTTGGACTTGAACATTTTACTCACGAGGCTGATCTCGTCTCAGTGATGCGCTCTGTTTTCGCCCAAACTCATCAGTGGAGGTGGGAAAGCGCCGTGTTGGGTTGTTGCTTTATTTTCTTCCTCCTTGTCACAAGATACTTCAGCAAACGACAACCAAAGTTCTTCTGGGTGTCAGCAATGGCACCATTGACGTCCGTCATACTGGGAAGTCTGCTGGTTTATCTCACGCACGCAGAGAAGCATGGAGTTCAAGTGATAGGAAAGTTGAAGAAGGGGCTGAATCCACCTTCCGTGATGGATTTGGTGTTGGTGTCACCTTATATGGGGACTGCCATAAAAACTGGACTAGTCACTGGCATTATAGCACTTGCGGAAGGAATAGCAGTAGGTAGAAGCTTTGCAATGTTTAAAAATTATCACATTGATGGGAACAAAGAGATGATAGCTATTGGAACCATGAATATTTTTGGTTCATTCACCTCTTGCTATCTCACCACAGGACCTTTTTCACGTTCAGCTGTGAACTATAATGCGGGGTGCAAGACTGCTGCATCAAACATTGTGATGGCAATAGCAGTGATGTTAACATTGTTATTCTTAACACCCTTGTTCCATTTCACTCCCCTGGTGGTGTTATCGGCCATAATTGTGTCAGCAATGCTCGGGCTCATTGATTATCAAGCAGCCATTCATTTGTGGAAAATTGACAAATTTGATTTCTTAGTGTGCTTCAGTGCTTATGTTGGTGTAGTCTTTGGCAGTGTTGAAATTGGCCTAGTCATAGCAGTTGCAGTATCTCTACTTCGAGTACTTCTATTTATTGCAAGGCCTAGAACATTTCTCTTGGGAAACATTCCAAATTCTTCAGTATACAGAAATGTGGAACAATATCCAAATGCAAATCATATTCCTGGAATCCTAATTCTAGAAATTGATGCTCCCATTTACTTTGCCAATGCAAGCTATTTAAGAGAAAGGATCACAAGGTGGATAGATGAAGAGGAAGATAGAATTAAAGCTTCAGGGCAAACCAGTTTGCAGTATGTTATAATGAATATGACTGCTGTTGCAAACATTGATACAAGCGGAATAAGCATGCTTGAAGAGTGCAAGAAGACTATTGACAGAAGAGGGTTACAACTTGTCTTGGTAAATCCTGGAAGCGAGGTGATGAAGAAGCTGAACAAATCCAAGTTCCTTGATGAACTAGGGCATAAATGGATGTATCTGACAGTTGAAGAGGCTGTTGGTGCATGCAACTTCATGCTCAACACATACAAACCCAACCCCATGAAGGATGATTCAGAAGGTTGGAACAATGCCTAA 1962 0.4399 MGNADYAYPNVECVHRVAIPPPQPFFKSLKYSLKETFFPDDPFRKFKNQTPSTKFVLGLQYFFPIFEWAPKYTLQFLKSDLISGITIASLAIPQGISYAKLANLPPILGLYSSFIPPLIYAMMGSSRDLAVGTVAVGSLLMASMLGRVVNYIENPNLFLHLAFTATFFAGVLQASLGLFRLGFIVDFLSHATIVGFMGGAATVVCLQQLKSILGLEHFTHEADLVSVMRSVFAQTHQWRWESAVLGCCFIFFLLVTRYFSKRQPKFFWVSAMAPLTSVILGSLLVYLTHAEKHGVQVIGKLKKGLNPPSVMDLVLVSPYMGTAIKTGLVTGIIALAEGIAVGRSFAMFKNYHIDGNKEMIAIGTMNIFGSFTSCYLTTGPFSRSAVNYNAGCKTAASNIVMAIAVMLTLLFLTPLFHFTPLVVLSAIIVSAMLGLIDYQAAIHLWKIDKFDFLVCFSAYVGVVFGSVEIGLVIAVAVSLLRVLLFIARPRTFLLGNIPNSSVYRNVEQYPNANHIPGILILEIDAPIYFANASYLRERITRWIDEEEDRIKASGQTSLQYVIMNMTAVANIDTSGISMLEECKKTIDRRGLQLVLVNPGSEVMKKLNKSKFLDELGHKWMYLTVEEAVGACNFMLNTYKPNPMKDDSEGWNNA* 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g02131 653 ProSiteProfiles STAS domain profile. 508 631 IPR002645 -
Lapu1g02131 653 Pfam STAS domain 509 627 IPR002645 -
Lapu1g02131 653 Gene3D STAS domain 488 633 IPR036513 -
Lapu1g02131 653 Pfam Sulfate permease family 77 457 IPR011547 GO:0016020
Lapu1g02131 653 CDD STAS_SulP_like_sulfate_transporter 509 624 - -
Lapu1g02131 653 ProSitePatterns SLC26A transporters signature. 106 127 IPR018045 GO:0008271|GO:0008272
Lapu1g02131 653 PANTHER SULFATE TRANSPORTER 26 634 IPR001902 GO:0016020|GO:0055085
Lapu1g02131 653 FunFam Sulfate transporter 31 488 634 - -
Lapu1g02131 653 NCBIfam sulfate permease 64 627 IPR001902 GO:0016020|GO:0055085
Lapu1g02131 653 SUPERFAMILY SpoIIaa-like 510 631 IPR036513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g02131 Lapu-Chr1 35430738 35442811 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g02131 15 641 Inorganic Solute Cotransporters AT4G02700 67.834 0.0 904
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g02131 K17471 - gmx:100791091 1232.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g02131 1 35430738 35442811 Lapu1g02131 1 35430738 35442811 ECH
Lapu1g02131 1 35430738 35442811 Lapu7g00253 7 2911900 2918584 PCT