Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g02120 ATGGGTCTGGAAAAGAATCTTCGTGTATTTCTGGATGTTTCAATTGATGCGGACCCTGCGGAAAGAATTGTTATCCAGCTTTTGGATGGTATCGTTCCAAAGACAGCCGAGAATTTTCGGGCGCTTTGTACAGGTGAGAAGGGCATTGGAGAATCAACTGGAAAACCTCTGCATTATAAGGGAACAAGCTTTCATCGTATAATTAGAGGTTTCATGGCTCAAGGTGGTGATTTTTCAAAGGGTAATGGCACGGGCGGGGAAAGTATTTATGGTGGAAAATTTGCAGATGAAAATTTCAAACAAACACATGATGGACCTGGCTTTCTTTCTATGGCTAACAGTGGCCCTAACACAAATGGATCTCAGTTCTTTATTACATTCAAGCGCCAACCTCATCTTGATGGGAAACATGTTGTTTTTGGAAAAGTTGTCAATGGAATGGATGTTCTGAAGAAAATCGAGCTGGTAGGAACATCTGATGGGAAACCTACCCAGACAGTTAAAATTATTGATTGCGGTGAAGTTTCTGAAACAAAAACTCAGCATACTGTTGTGAAGGAGAAAGGGAAAAGGAGAAAATCAGGGAAATCTCTTAGCTCTGATGATAGTTCTGAGTCTTCTGACAAAAAATCAAGGGGGAAAAGGAAAAAATCTTCCAAAGACACAAGGAAAAAAAGGAGAAGATACTCAACATCTGAGAGTGATAGTTATTCCTCGGATTCTGAATCAGATTCGGCTTCAGATTCATCTGATTCTGATTCTAGTTCCTCTAGTTATGGGAAACACCAGAAGAGGAGAAATAAGCGCAAGCATGGGAAGAAGGGGAAAATTGGACGAAAGCAGAGAAAGAGAAGCAGGCACAGTCGAAGTAGAAGATCAAAGCACAAGTATAGACATAGTTCTGAGGATTCAAGTGATAGCTCTAGTGCTAGTGGCAGTAGTTCTGGTGATGAGAAAACTGATCGTCGCGCCTCAGGTCGTAAAACACATGCTGACAATAAAGCACAAAGAAATCAAGACACAGAAAAGCAATCTTCTGGCCTTCCTCAACAAGATCAAATTATTCCAGAGCAAACAACTGATACCAAGGTTAGAAGAACTGTAGACAAGCAATCACATGAAGAAGGTGAATTGTCTCCAGAAAATGGGGCATTTGTGAATAACGGGCATGATACTCAAGCTGAATTTAGTAAACCTGCTAAGCAACATGCTAATTCGGATAATTCAGATCTCAATAGAAGTGCAAGAATTGGGAGAAGTCCTACCAGGGATTCTGGTGAGCTAAACCAAGGACGTGCTTTGTTGCTGGCTAGTTCTGGCCAAAAATCATCCGAACCTGCAGCACCAAAACATAGTCAGGGCTTTTCAAAAAGCCCTTCACCAAATGGCATGCCTAAGCGTATTAAAAAAGGACGTGGCTTTACTGAGCGTTATGCATTTGCCCGCAGATATCGTACTCCATCTCCTGAGCGGTCTCCTCGCACATATCGGTATGGTGATAGAAATATAAGAAGGAACTTTGATAGAAACACAAGCTACAGAAATTATTCTGAGCGCTCTCCACCACGACGTTATCGAAGCCCACCTGGGGGCAGAAATCATCCAAGATACCGAAACAGGAGAAGTCGTAGTAGGAGCATCTCTCGCAGTCCAGTGCGTGGCCGTTTTAGAGACCGTGGCCGGAGTCGGAGTAGGAGCCCAAGACGTAGTCTTAGTCCTGAGGACAGGCGGCCTCCCATAAGTGACAGATTAAAATCCCGACTTGGTCCAAGAAGTGATGAACGATTGGCAGACAGGAGGGGGAGGTCAAAGTCCAATTCTAGGAGCAATGGCTCATCTCGCTCCAGATCCCCTGATGCTACACCACCTAAACGATATGATAAAAGAACTTCCGTATCTCGTAGCAGATCTAGGTCCAGCTCTTCATCGGGTCAGAAGGGTTTAGTTTCTTATGGAGATGCTAGTCCTGATTCTGGGGTAAGGTAA 1986 0.4361 MGLEKNLRVFLDVSIDADPAERIVIQLLDGIVPKTAENFRALCTGEKGIGESTGKPLHYKGTSFHRIIRGFMAQGGDFSKGNGTGGESIYGGKFADENFKQTHDGPGFLSMANSGPNTNGSQFFITFKRQPHLDGKHVVFGKVVNGMDVLKKIELVGTSDGKPTQTVKIIDCGEVSETKTQHTVVKEKGKRRKSGKSLSSDDSSESSDKKSRGKRKKSSKDTRKKRRRYSTSESDSYSSDSESDSASDSSDSDSSSSSYGKHQKRRNKRKHGKKGKIGRKQRKRSRHSRSRRSKHKYRHSSEDSSDSSSASGSSSGDEKTDRRASGRKTHADNKAQRNQDTEKQSSGLPQQDQIIPEQTTDTKVRRTVDKQSHEEGELSPENGAFVNNGHDTQAEFSKPAKQHANSDNSDLNRSARIGRSPTRDSGELNQGRALLLASSGQKSSEPAAPKHSQGFSKSPSPNGMPKRIKKGRGFTERYAFARRYRTPSPERSPRTYRYGDRNIRRNFDRNTSYRNYSERSPPRRYRSPPGGRNHPRYRNRRSRSRSISRSPVRGRFRDRGRSRSRSPRRSLSPEDRRPPISDRLKSRLGPRSDERLADRRGRSKSNSRSNGSSRSRSPDATPPKRYDKRTSVSRSRSRSSSSSGQKGLVSYGDASPDSGVR* 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g02120 661 Gene3D - 2 183 IPR029000 -
Lapu1g02120 661 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 122 134 IPR002130 GO:0000413|GO:0003755
Lapu1g02120 661 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 135 150 IPR002130 GO:0000413|GO:0003755
Lapu1g02120 661 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 64 76 IPR002130 GO:0000413|GO:0003755
Lapu1g02120 661 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 27 42 IPR002130 GO:0000413|GO:0003755
Lapu1g02120 661 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 107 122 IPR002130 GO:0000413|GO:0003755
Lapu1g02120 661 MobiDBLite consensus disorder prediction 620 634 - -
Lapu1g02120 661 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 8 175 - -
Lapu1g02120 661 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 59 76 IPR020892 GO:0003755|GO:0006457
Lapu1g02120 661 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 16 173 IPR002130 GO:0000413|GO:0003755
Lapu1g02120 661 SUPERFAMILY Cyclophilin-like 7 177 IPR029000 -
Lapu1g02120 661 MobiDBLite consensus disorder prediction 362 377 - -
Lapu1g02120 661 MobiDBLite consensus disorder prediction 635 649 - -
Lapu1g02120 661 MobiDBLite consensus disorder prediction 340 361 - -
Lapu1g02120 661 FunFam Peptidyl-prolyl cis-trans isomerase CYP95 1 182 - -
Lapu1g02120 661 MobiDBLite consensus disorder prediction 178 661 - -
Lapu1g02120 661 MobiDBLite consensus disorder prediction 316 339 - -
Lapu1g02120 661 MobiDBLite consensus disorder prediction 565 605 - -
Lapu1g02120 661 CDD cyclophilin_ABH_like 8 173 - -
Lapu1g02120 661 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 10 174 IPR002130 GO:0000413|GO:0003755
Lapu1g02120 661 MobiDBLite consensus disorder prediction 234 257 - -
Lapu1g02120 661 MobiDBLite consensus disorder prediction 385 460 - -
Lapu1g02120 661 MobiDBLite consensus disorder prediction 529 550 - -
Lapu1g02120 661 MobiDBLite consensus disorder prediction 261 296 - -
Lapu1g02120 661 MobiDBLite consensus disorder prediction 194 212 - -
Lapu1g02120 661 MobiDBLite consensus disorder prediction 469 512 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g02120 Lapu-Chr1 35209272 35216094 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g02120 25 171 U-box Gene Family AT5G67530 48.322 1.76e-32 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g02120 K09566 - gmx:100791082 768.459
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g02120 1 35209272 35216094 Lapu1g02120 1 35209272 35216094 ECH