Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g02108 ATGGCCAATGGATACGAGGGATGTGCAGTGGGAATCGACCTGGGCACAACTTACTCGTGTGTTGCAGTATGGTCAGAGCAGCACTGTCGAGTTGAGATCATCCACAATGACCAAGGCAACAAAACCACTCCTTCTTTTGTTGCTTTCACGGGTCATCAGAGGTTGATTGGTGATACAGCTAAAAATCAGGCTGCTACCAACCCAGAGAACACCATCTTTGATGCTAAGAGGTTGATTGGTAGGAAATATAGTGATCCCATTATTCAAGAAGACAAAATCTTATGGCCATTCAAGGTCATTGCTGGTGTTGATGACAAACCCACGATGGTGGTTAACTACAAGGGTCAAGAGAAGCATCTTTGTGCTGAAGAAGTATCAGCTATGATCCTAGCAAAGATGAGGGAGATTGCAGAGGCGTACACGGAATCACCGGTTAAGAACGCAGTTGTTACTGTGCCTGCTTATTTCACTGACTCTCAGCGTAAAGCCACAGTAGATGCTGGAGCTATTGCTGGCCTCAATGTTATGCGGATAATCAATGAACCCACTGCTGCAGCTATTGCATATGGCCTTAACAAGAGAAATAACTGTGTTGAAGAGCGAAACGTCTTTGTGTTTGACCTTGGTGGTGGTACTTTTGATGTGTCTCTCCTCAGAATTAAGGACAAGGTCTTCCAAGTTAAGGCTACTGCAGGAAACACTCACCTTGGAGGAGAGGACTTTGACAGCAGAATGGTGAAGCACTTTGTTGAGGAGATCAACAGGAAGAACAAAGTGGACATTGGTGGAAGCCCTAGAGCCTTGAGGAGATTGAGAACTGCATGTGAGAGGGCAAAAAGGACACTCTCATTTTGTGTTACTACCAACATAGAGATAGATGCATTGTTTAACGGCATTGACTTCTGCTCTTCAATCACTCGAGCAAAGTTTGAAGAGATAAATATGGAGCTGTTTGAAGAGTGCATGAGGATCGTAGACAGATGTCTTATCTATGGTAATATGGACAACAAGAGCAACGTTCATGATGTTGTCCTTGTTGGCGGTTCTTCGAGGATTCCCAAAGTGCAGAAGCTGTTGCAGGAGTTCTTCGGGAGAAAGGATCTCTGCAAGAGCATCAACCCTGATGAGGCTGTTGCTTATGGTGCAGCTGTGCAAGCTGCTTTGTTGAGTGAAGGAATTGGTAATGTTCCAAACTTGGTACTCTCGGATGTTACACCATTATCTCTTGGTATATGCTTATATCAAGGTGTGATGAGTGTGGTGATTCCTAGGAACACTTCCATTCCTGTGAGGAAGATTGAAGAATTCCACACAGCAACAGATAACCAATATGAAATCGATATTGAGGTTTACGAGGGTGAGAGAACAAGATCCAGAGATAACAATTTGTTGGGTTCTTTTGTTCTTTCTGGTATTCCTCCTGCTCCTCGTGGCCACCCTTTTTATGTAAGTTTTGCTATAGATGCAAATGGTATCTTGACTGTTTCTGCTGAGGAAAAAACCAGTGGAAATAAGAACGAATTTACAATAATGAATCACAATCTGTCAGCTGAAAAAATTGGAAGATTGATTAAAGAAGCTGAGATGTATGAAGCTGAGGATAAGAAGTTCCTTAGGAAGGCCAAAGCAATGAACTCTTTGGATGATTACATTTACAAGATGAAGAGAGCTTTGAAGAGGAAGGATATGAGTTCAAAGCTTTGCACACAAGAAAGGAAGAAGATCAGTTTTGCAATTACCAAGGCCACAAAATTGCTAGATGGTAATAACAGGAAAGTGGAAGCTGAGGTGTTTGAGGATTATCTGAAGGATCTTGCCAGTGACTTTGAACCCGTCGTAGGCAAGATTAATTAG 1854 0.4272 MANGYEGCAVGIDLGTTYSCVAVWSEQHCRVEIIHNDQGNKTTPSFVAFTGHQRLIGDTAKNQAATNPENTIFDAKRLIGRKYSDPIIQEDKILWPFKVIAGVDDKPTMVVNYKGQEKHLCAEEVSAMILAKMREIAEAYTESPVKNAVVTVPAYFTDSQRKATVDAGAIAGLNVMRIINEPTAAAIAYGLNKRNNCVEERNVFVFDLGGGTFDVSLLRIKDKVFQVKATAGNTHLGGEDFDSRMVKHFVEEINRKNKVDIGGSPRALRRLRTACERAKRTLSFCVTTNIEIDALFNGIDFCSSITRAKFEEINMELFEECMRIVDRCLIYGNMDNKSNVHDVVLVGGSSRIPKVQKLLQEFFGRKDLCKSINPDEAVAYGAAVQAALLSEGIGNVPNLVLSDVTPLSLGICLYQGVMSVVIPRNTSIPVRKIEEFHTATDNQYEIDIEVYEGERTRSRDNNLLGSFVLSGIPPAPRGHPFYVSFAIDANGILTVSAEEKTSGNKNEFTIMNHNLSAEKIGRLIKEAEMYEAEDKKFLRKAKAMNSLDDYIYKMKRALKRKDMSSKLCTQERKKISFAITKATKLLDGNNRKVEAEVFEDYLKDLASDFEPVVGKIN* 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g02108 617 FunFam Heat shock 70 kDa protein 393 544 - -
Lapu1g02108 617 PRINTS 70kDa heat shock protein signature 60 68 - -
Lapu1g02108 617 PRINTS 70kDa heat shock protein signature 148 168 - -
Lapu1g02108 617 PRINTS 70kDa heat shock protein signature 372 392 - -
Lapu1g02108 617 PRINTS 70kDa heat shock protein signature 398 417 - -
Lapu1g02108 617 PRINTS 70kDa heat shock protein signature 340 356 - -
Lapu1g02108 617 PRINTS 70kDa heat shock protein signature 8 21 - -
Lapu1g02108 617 PRINTS 70kDa heat shock protein signature 478 494 - -
Lapu1g02108 617 PRINTS 70kDa heat shock protein signature 38 50 - -
Lapu1g02108 617 PRINTS 70kDa heat shock protein signature 211 221 - -
Lapu1g02108 617 Gene3D - 515 617 IPR029048 -
Lapu1g02108 617 Gene3D - 194 369 - -
Lapu1g02108 617 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Lapu1g02108 617 ProSitePatterns Heat shock hsp70 proteins family signature 2. 205 218 IPR018181 -
Lapu1g02108 617 FunFam Heat shock 70 kDa 237 320 - -
Lapu1g02108 617 SUPERFAMILY Actin-like ATPase domain 199 390 IPR043129 -
Lapu1g02108 617 FunFam heat shock 70 kDa protein-like 73 128 - -
Lapu1g02108 617 Gene3D - 10 385 - -
Lapu1g02108 617 FunFam Heat shock protein 70 10 204 - -
Lapu1g02108 617 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 543 616 IPR029048 -
Lapu1g02108 617 Pfam Hsp70 protein 9 614 IPR013126 GO:0005524|GO:0140662
Lapu1g02108 617 PANTHER HEAT SHOCK PROTEIN 70KDA 9 572 IPR013126 GO:0005524|GO:0140662
Lapu1g02108 617 SUPERFAMILY Actin-like ATPase domain 9 193 IPR043129 -
Lapu1g02108 617 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 386 514 IPR029047 -
Lapu1g02108 617 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 394 548 IPR029047 -
Lapu1g02108 617 ProSitePatterns Heat shock hsp70 proteins family signature 3. 343 357 IPR018181 -
Lapu1g02108 617 Gene3D - 73 128 - -
Lapu1g02108 617 Gene3D Actin; Chain A, domain 4 237 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g02108 Lapu-Chr1 35094659 35096793 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g02108 1 616 Calmodulin-binding Proteins AT3G12580 64.839 0.0 805
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g02108 K03283 - gmx:102667578 929.472