Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g02105 ATGCACCCTCTTCTCCTCAAACCCATTTTTCTTAATGTCTTATCCGCCTCCCTCCACTGTCTCCTATTGCTATCAGTTTCGCTGTCATGGCTTCGGAACAAAATGGCATTCACGCCAGGAACCAGGGAAGAAAACTCTATGGAGAAAGAGAAATCCAATGACAGTAAGACCCTCTTCCAAACGGCCGTGTTTTGTTCTCTAGGTGTTTCTGCTTTCAGTTTCGTTCTCTGTTTCTTTAATTACTTCTATTGGTATACAAGTGGGTGGTCAGAACAAAATTTTATGACCCTTTCGGATTTGGCTCTCAAAACACTTGCTTGGGGTGTTGTTTGCGTTTCCTTGCACAAAGGGTTCTTCTTTTTCAGTTCCGGGGAAACCAGGTTCAGATTTTCATTCTTCTTCAGAGTTTGGTGCACCTTGTATCTCGTTTTCTCTTGTTATTCCCTCATGGTGGATATTGTCGTTTTCTCCGAGATACCAACTCAATTATTGGTTTATGATGTTGCGTCCACCTGTGCTGGATTTTTGTTTTGTTACGTCGGGTACTTTGTGAAAAAGAAGGATCACCTTAACGGTATTGAGGAACCTCTTTTGAATGGTGATGCAAAAGAGACCAATAGTGGGGAAAATGTTACTCCTTTTTCACATGCTGGATTTTTTAACATTCTCACTTTCGCTTGGGTGGGTTCTCTTGTGGCTGCTGGCTACAAAAAGACCTTGGACCTTCAGGATGTTCCTAAACTAGACACTAGAGACAGTGTGGTTGGTGCTTTTCCTAGTTTCAGAGATAAACTTGAGTTTGATTATGGTGCAAATGCAATTAACAATCTCACCACGCCTAAGCTGGTGAAGAGTTTAGTAATGTCAGCGTGGAAGGAAATTCTCTTCACAGCTTTTCTTGCATTGTTAAGCACTTTGGCTTCTTATGTTGGTCCTTACCTTATTGATGGTTTAGTTCAGTATCTTGATGGACAACGACTGCATGAAAACCAGGGTTATGTTTTGGTTTCTGCCTTTTTCTTTGCAAAGATTGTAGAGTGCCTCTCTCAAAGGCATTGGTTCTTTAGGTTGCAGCAGATTGGAATTCGAATTCGAGCACTGCTTGTTGCGATGATCTACAATAAGGCTCTCACACTTTCTTGTCAATCAAAGCAGGGCCACACTTCTGGGGAAATAATTAATTTCATGACTGTTGATGCTGAAAGAGTTGGTGTCTTCAGTTGGTACATGCATGATTTGTGGATGGTGGCGCTGCAAGTCGCATTGGCCTTGTTGATTTTGTATAAAAACCTTGGCCTTGCTTCCATTGCTGCTCTTGTTGCCACCATTGTTGTTATGTTGGTAAATGTTCCCTTGGGATCATTGCTACAAAAGTTTCAAAATAAGTTGATGGAGTCAAAAGATATTAGAATGAAGGCCACATCCGAGGTTTTGAGGAACATGAGGATCCTCAAACTACAAGGTTGGGAAATCAAGTTTCTATCAAAAATAACTGAGCTCAGGAAAACTGAGGAAGGTTGGTTAAAAAGATTTGTTTATACCTCGGCCATGACCACATTTGTGTTTTGGGGTGCACCCACATTTGTATCTGTGGTTACTTTCGGCACTTGTATGTTTATGGGGATACCCCTTGAAGCAGGGAAGATCTTGTCTGCACTTGCAACATTCCGGATTCTTCAAGAGCCCATTTATAACCTTCCTGATACAGTTTCAATGATAGCACAAACTAAAGTTTCTCTTGATAGGATTTCATCATTCCTTCGGCTTGATGACTTACCGTCTGATGTTGTAGAGAAGCTTCCTCAGGGCAGTTCTAATACGGCAATTGAAGTAATTGATGGAAACTTCTCTTGGGATTTATCTTCGCCTAACCCAACATTGCAAAATATAAACCTTAAAGTTTTTCTTGGGATGAGGGTTGCCGTTTGTGGTGCTGTTGGATCGGGCAAGTCGACTTTACTTTCTTGTGTATTAGGAGAAGTACCTAAGATATCAGGCAATCTTAAGGTTTGTGGAACAAAGGCCTATGTTGCTCAGTCTCCATGGATACAAAGCGGCAAGATAGAGGCTAATATTTTGTTTGGTAAACACATGGATAGGGAGAGGTATGAGAAGGTACTTGAAGCTTGTTCCCTGAAGAAGGACCTGGAGATTTTTTCATTTGGTGATCAGACAATTATAGGAGAACGTGGAATAAATTTGAGTGGTGGACAGAAACAAAGAATTCAAATTGCACGTGCTCTGTACCAAGATGCCGATATATATCTATTTGATGATCCTTTTAGTGCTGTGGATGCTCACACAGGCTCTCACCTATTTAAGGAATGCTTGCTTGGTCATTTATGTTCAAAAACAGTGGTTTATGTCACTCATCAGATGGAGTTCTTACCTGCCGCTGACCTTATATTGGTCATCAAAGATGGGAGAATTACTCAATGTGGAAAGTATATTGATCTTCTAGATAGTGGTACTGATTTTATGGAACTTGTTGGTGCACACAAGAAAGCTCTATCTACTCTAGATTCATTGAATGGAGTGACAACATCCAATGAAATAAGTACCTTAAAGAAAGAAGCAAATGTCTCTGGCACACACGGTTTTAGAGAAAAAGAGGCAAGCAAAGATGAAAATGGGGAAACACCCAACCAAAGTGAACCAAAAGGTCAGCTTGTTCAAGAAGAAGAAAGGGAGAAAGGTAAAGTTGGGTTTTTAGTCTATTGGAACTATATCAGAACGGCATATGGTGGAGCTCTGGTACCTTTCATATTGTTGGCTCAGATTCTTTTTGAAGCTCTTCAAATAGGAAGCAATTATTGGATGGCTTGGGCTACTCCCATCTCAACACATGTGCAGCCACGTGTTGAAGGAATGACTCTTATAGGAGTCTATGTTGGTTTGGCTATTGGAAGTTCTTTCTGCGTTCTTGTCAGAGCAATGCTTCTTGTCACAGCAGGTTATGAGACAGCTACTATACTCTTCAATAAAATGCACTTCTGCATTTTCCGTGCTCCAATGTCATTTTTTGATTCCACCCCAAGTGGCCGAGTCCTTAACAGAGCTTCAACTGATCAAAGTGCAGTGGATACAGACATTCCTTATCAAATTGGCTCACTTGCCTTCTCTATGATCCAGCTTCTGGGAATTATAGTAGTGATGTCTCAGGTTGCATGGCAGGTTTTCATTGTCTTTATACCTGTAATAGCAGTCAGCATATGGTATCAGCAATATTACATACCATCAGCTCGAGAACTATCACGTTTAATTGGAGTCTGCAAAGCCCCAGTAATTCAACACTTTGCGGAGACAATTTCGGGTACTTCAACCATCAGAAGCTATGACCAGCAGTCTAGATTTAGAGAGACAAATATGAAACTGGCTGATGAGTATTCTCGGCCAAACTTCAATATTGTTGGCGCCATGGAATGGTTGTGCTTCCGCTTAGATATGTTGTCTTCAATCACATTTGCCTTTTCCTTATTAGTCTTAATATCTATTCCACCGGGAATCATAGATCCAGGCATTGCTGGTTTAGTTGTTACATATGGACTTAATTTGAACATGATACAAGCTTGGGTGATATGGAATCTGTGCAACATAGAGAACAAAATTATATCAGTAGAAAGAATACTTCAGTATACTTGTATTCCTAGTGAGCCTCCCCTCGTTGTAGAAGAAAATCGGTCCACTCCTTCTTGGCCATCATATGGCGAGGTTGATATACAAGATTTGAAGGTTCGTTATGCTCCACATCTTCCATTTGTGTTGCGTGGTATAACATGTAAGTTTCGTGGAGGATTGAAAACTGGCATTGTTGGGAGAACAGGAAGTGGTAAATCCACTCTCATCCAAGCACTTTTCCGAATTGTTGAGCCTACCTGTGGTCAGATTATAATTGACAACATCAATATCTCTTCAATTGGACTTCATGATTTGAGGTCTAAACTAAGCATTATTCCTCAGGATCCAACAATGTTTGAAGGAACTGTGAGAAATAATCTAGACCCTCTGGAAGAATACACAGATGAACAAATTTGGGAGGCTCTGGATAAGTGTCAACTTGGAGATGAAGTTAGAAAGAAAGAAGGAAAGCTCGACTCCACAGTTACTGAGAATGGTGAGAATTGGAGTATGGGTCAGAGGCAGTTGGTCTGCCTTGGCAGGGTGCTTCTTAAGAAAAGCAAGGTTTTGGTACTTGATGAAGCCACTGCATCAGTAGATACAGCTACAGATAATTTGATTCAGCAGACTCTTAGGCAACATTTCTCTGTCTCTACAGTCATTACAATTGCACACAGAATAACTTCTGTTGTTGACAGTGATATGGTTCTGCTTCTTAGTCAAGGACTTATTGAAGAGTATGACACCCCAATGACTTTGCTAGAGAATAAGTCTTCATCTTTTGCACATCTTGTTGCAGAGTATACCAAGTGGTCCAACTCCAATTTTGAGAAATCTGTGGATCACTGA 4467 0.4077 MHPLLLKPIFLNVLSASLHCLLLLSVSLSWLRNKMAFTPGTREENSMEKEKSNDSKTLFQTAVFCSLGVSAFSFVLCFFNYFYWYTSGWSEQNFMTLSDLALKTLAWGVVCVSLHKGFFFFSSGETRFRFSFFFRVWCTLYLVFSCYSLMVDIVVFSEIPTQLLVYDVASTCAGFLFCYVGYFVKKKDHLNGIEEPLLNGDAKETNSGENVTPFSHAGFFNILTFAWVGSLVAAGYKKTLDLQDVPKLDTRDSVVGAFPSFRDKLEFDYGANAINNLTTPKLVKSLVMSAWKEILFTAFLALLSTLASYVGPYLIDGLVQYLDGQRLHENQGYVLVSAFFFAKIVECLSQRHWFFRLQQIGIRIRALLVAMIYNKALTLSCQSKQGHTSGEIINFMTVDAERVGVFSWYMHDLWMVALQVALALLILYKNLGLASIAALVATIVVMLVNVPLGSLLQKFQNKLMESKDIRMKATSEVLRNMRILKLQGWEIKFLSKITELRKTEEGWLKRFVYTSAMTTFVFWGAPTFVSVVTFGTCMFMGIPLEAGKILSALATFRILQEPIYNLPDTVSMIAQTKVSLDRISSFLRLDDLPSDVVEKLPQGSSNTAIEVIDGNFSWDLSSPNPTLQNINLKVFLGMRVAVCGAVGSGKSTLLSCVLGEVPKISGNLKVCGTKAYVAQSPWIQSGKIEANILFGKHMDRERYEKVLEACSLKKDLEIFSFGDQTIIGERGINLSGGQKQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKECLLGHLCSKTVVYVTHQMEFLPAADLILVIKDGRITQCGKYIDLLDSGTDFMELVGAHKKALSTLDSLNGVTTSNEISTLKKEANVSGTHGFREKEASKDENGETPNQSEPKGQLVQEEEREKGKVGFLVYWNYIRTAYGGALVPFILLAQILFEALQIGSNYWMAWATPISTHVQPRVEGMTLIGVYVGLAIGSSFCVLVRAMLLVTAGYETATILFNKMHFCIFRAPMSFFDSTPSGRVLNRASTDQSAVDTDIPYQIGSLAFSMIQLLGIIVVMSQVAWQVFIVFIPVIAVSIWYQQYYIPSARELSRLIGVCKAPVIQHFAETISGTSTIRSYDQQSRFRETNMKLADEYSRPNFNIVGAMEWLCFRLDMLSSITFAFSLLVLISIPPGIIDPGIAGLVVTYGLNLNMIQAWVIWNLCNIENKIISVERILQYTCIPSEPPLVVEENRSTPSWPSYGEVDIQDLKVRYAPHLPFVLRGITCKFRGGLKTGIVGRTGSGKSTLIQALFRIVEPTCGQIIIDNINISSIGLHDLRSKLSIIPQDPTMFEGTVRNNLDPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSTVTENGENWSMGQRQLVCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFSVSTVITIAHRITSVVDSDMVLLLSQGLIEEYDTPMTLLENKSSSFAHLVAEYTKWSNSNFEKSVDH* 1489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g02105 1488 MobiDBLite consensus disorder prediction 861 894 - -
Lapu1g02105 1488 FunFam ABC transporter C family member 5 882 1219 - -
Lapu1g02105 1488 Pfam ABC transporter 1255 1403 IPR003439 GO:0005524
Lapu1g02105 1488 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 609 832 IPR003439 GO:0005524
Lapu1g02105 1488 Gene3D - 1221 1474 IPR027417 -
Lapu1g02105 1488 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 921 1201 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lapu1g02105 1488 SMART AAA_5 1264 1456 IPR003593 GO:0016887
Lapu1g02105 1488 SMART AAA_5 636 809 IPR003593 GO:0016887
Lapu1g02105 1488 CDD ABCC_MRP_domain2 1236 1456 - -
Lapu1g02105 1488 ProSitePatterns ABC transporters family signature. 734 748 IPR017871 GO:0005524|GO:0016887
Lapu1g02105 1488 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 606 831 IPR027417 -
Lapu1g02105 1488 MobiDBLite consensus disorder prediction 862 881 - -
Lapu1g02105 1488 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 295 575 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lapu1g02105 1488 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 214 1475 - -
Lapu1g02105 1488 Pfam ABC transporter transmembrane region 295 562 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lapu1g02105 1488 Pfam ABC transporter transmembrane region 921 1161 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lapu1g02105 1488 FunFam ABC transporter C family member 10 278 591 - -
Lapu1g02105 1488 FunFam ABC transporter C family member 5 594 841 - -
Lapu1g02105 1488 Gene3D ABC transporter type 1, transmembrane domain 275 591 IPR036640 GO:0005524|GO:0016020
Lapu1g02105 1488 Gene3D ABC transporter type 1, transmembrane domain 882 1219 IPR036640 GO:0005524|GO:0016020
Lapu1g02105 1488 SUPERFAMILY ABC transporter transmembrane region 284 595 IPR036640 GO:0005524|GO:0016020
Lapu1g02105 1488 CDD ABC_6TM_ABCC_D1 296 583 IPR044746 GO:0140359
Lapu1g02105 1488 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1238 1472 IPR003439 GO:0005524
Lapu1g02105 1488 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1228 1464 IPR027417 -
Lapu1g02105 1488 CDD ABC_6TM_ABCC_D2 919 1213 IPR044726 GO:0140359
Lapu1g02105 1488 FunFam ABC transporter C family member 3 1221 1473 - -
Lapu1g02105 1488 Gene3D - 593 849 IPR027417 -
Lapu1g02105 1488 SUPERFAMILY ABC transporter transmembrane region 919 1219 IPR036640 GO:0005524|GO:0016020
Lapu1g02105 1488 CDD ABCC_MRP_domain1 609 809 - -
Lapu1g02105 1488 Pfam ABC transporter 627 761 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g02105 Lapu-Chr1 35059759 35065576 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g02105 609 839 Calmodulin-binding Proteins AT2G36910 29.482 2.02e-22 103