Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g02077 ATGGGTAAGATTGAACTAGTAGAGAAAATTGTAATTGTTCCTGAGCAACCTACACCCCGCAAGATAATGTTCTTGTCAAATATTGACCTGTCCCTTGTTGTTTACCAAGACTCTGCCTCATTTTTTGACCCTCCAAGTACCCAAATGAGTTTCAGTGAGATTTGTAACAAATTATACAGAGCACTTAGTAAAATGCTAGTGCAATATGACTTTATGGCTGGCAGACTAGTGCCAAGTTTGGAAGGGACTCAGAGATTTGAAATTGACTGTAATGGTGCTGGCATTGTGGTTGCAGCTGCAAGAACTGACAGAAAATTGAGTGAATTTGGTGTGATTTCTGCACCTAATCCAGAGTTGAGGGAATTAGTTGTTTTCTTGCATGAAGGGTGTGATCAAGAAACTGATCTGAAAGAAAAACCCCTTGCATCCTTACAGCTGACTCAGTTTGGTTGTGGAAGTTTGGCACTTGCTTCTCACTACAATCACTGCACACTGGACGGTTTTGCAATAAGAGATTTTGAGGTAAACTTAGGTGCACTAACGCGTGGTGAGGACCTCATCATAGTACCTAATGCAGATAGAACACTGCTGAGAGCTCGAAACCCTCCAATTGTAAGTCATCCACATTTTGAGTATTCAAAATCTACTGTGACAGACAACTTGTTCACTCTCCGAGGCAAAAGTGGTACCAATGTTATACAATCCGTGCCAGAAAACCAGATTCATGTGCTTTATTTGTCGCCACAAAGCATTGCTGGCTTCAAAAAGAAAGCCCTGGAGAACAACACCTTAAAGAACATCACCACTTTTCAGGTTGTTGCTGCAAAAATATGGAAGGCAAGAAGCATTGCAACAAGGATGTCAGAGGAAAGAGTATCCACAATGCTGTTTCCAGTGGATGTGAGGAAAAGGGTAGTTCCTGAACTCCCAGATAGCTTTGCAGGAAATGCATTGGTGCCTGGTTTTGCAAGAGCAACCGTGAGGGAGCTGAAGGAGCTAGAAGATGCCTGTCATATAAGGAAAGTGCAAGAAGGGGTAGAAAGGTTAGATGATGAGTACATTAAGTCAGGGATAGATTGGTTAGAAGTGAACAAAGGGGCACCTTGTATGGAAGATAGTTTCTCCTTGGTGGCATGGTGGAGATTGGGGTTGGAGGAGCAACTTTTTGCATGGGGTAGACTAAAGTGTGCTACTCCACTAAAAGTTAAGCCTGGTTTGGTCATGGTATTGCCAGGGCCACAAGACCAAGGGGGCATGAACATATGCCTTGATTTACCTGAGGATCAAATGCAAGATTTTAGTAGGATAATGCTAGAAATTTAG 1323 0.4255 MGKIELVEKIVIVPEQPTPRKIMFLSNIDLSLVVYQDSASFFDPPSTQMSFSEICNKLYRALSKMLVQYDFMAGRLVPSLEGTQRFEIDCNGAGIVVAAARTDRKLSEFGVISAPNPELRELVVFLHEGCDQETDLKEKPLASLQLTQFGCGSLALASHYNHCTLDGFAIRDFEVNLGALTRGEDLIIVPNADRTLLRARNPPIVSHPHFEYSKSTVTDNLFTLRGKSGTNVIQSVPENQIHVLYLSPQSIAGFKKKALENNTLKNITTFQVVAAKIWKARSIATRMSEERVSTMLFPVDVRKRVVPELPDSFAGNALVPGFARATVRELKELEDACHIRKVQEGVERLDDEYIKSGIDWLEVNKGAPCMEDSFSLVAWWRLGLEEQLFAWGRLKCATPLKVKPGLVMVLPGPQDQGGMNICLDLPEDQMQDFSRIMLEI* 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g02077 440 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 12 430 - -
Lapu1g02077 440 Gene3D - 2 214 IPR023213 -
Lapu1g02077 440 Pfam Transferase family 3 434 - -
Lapu1g02077 440 Gene3D - 229 439 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g02077 Lapu-Chr1 34756122 34758268 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g02077 3 440 Monolignol Biosynthesis Gene Families AT5G48930 28.571 7.44e-56 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g02077 K15400 - gmx:100801822 776.163