Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g02056 ATGGGTTTCAGCAGCCGTACCAACTTGTTCTTTCTTTTGTTCATGCTGTGGTTTTATGTGTTCGACGTTGGTATTGCCACAGACACCATCACATCATCACAATCCATCAAGGAACCTGAAACTCTAAGGTCCAAAGATGGTAACTTCACTTTGGGGTTCTTCACCCCTCCAAACTCCACAAACCACTACGTTGGAATTTGGTGGAAGACTCAATCCACAGTCGTATGGGTTGCTAACAGAAATCAGCCAATGAATGATTCTTCAGGAGTTGTTACCATTTCTGAAGATGGCAATCTTGAGGTGCTGAATGGACAGGATCATGTCATTTGGTCAACATCTGTGTCAAGCACATCATCCAATACAAGTGCCCAGCTTTCAGACGTGGGGAAGCTTGAACTCACGGAAACCACAACGGGGAACAGCTTATGGGATAGTTTTCAGCAACCTTCAAATACACTATTACCCCAAATGAAAATCTCAAGCAATAGAACAGGTAGGGGAGTACAACTTACATCATGGAAGAACCCTTCTAATCCCTCTGTTGGGAACTTCTCTGTGGGTGTTGTTCAACGCGAAAAAATCGTTGAAGTGTTTATTTGGAATGAAACTCGACCATACTGGCGCAGTGGTCCATGGAGCGGTGGGGTCTTTACAGGGGTAGAGCATATGGCTAGTGCATATCTAAATTATTTTTCTGTTGTAGATGGTGATGTCCATTATAACCCAGAAAGTGGATCAGAATTTATGATCTATATGCTGAATTCGCAAGGCCAATTAGAAGAAAACAGGTGGGATGATGAGACGAAAGAACTGCAAGTTTCGTGGACGAGTATACAATCGGGTTGTGATGTTTATGGTGTATGCGGGTCGTTCGCAATCTGTGATGCACAGAACCAAGGAACAAATGGCTCACCAATATGCAGCTGTTTGAAAGGGTTTGAGCCAATGAACAAAGAGGAATGGGATGCACAAAACTGGACAAGTGGATGTTTTAGGAGCATAACGTTGCAGTGTGAAAGAGCCAAAGAGCAAAACACTAGTATGGATACAAATGAAGATAAATTTTTGGAACTGCAAATGGTGAAAGTTCCTGATTTTCCTGAAGAGTCTAGTGTTGATCCAGACACATGCAGAAGCAAATGCCTGGAGAATTGCTCTTGTGTAGCGTATTCTCACGATGATGGGATTGGTTGTATGTCTTGGACTGGGAATCTACTGGACATCCAGCAACTCTCAAGTCGAGGACTTCATCTATATGTTCGTGTAGACTCTTCTGAACTTCAACATGATGAAGGGAGAAAGACAACAATTATCATTACAATATCAGTGATAATAGGAACTTTGATCATTGTCACTTGTGCATGTGTAATGTGGAGGAGGACCTCCTGTCACCCAGCTAAAATATGGTACTCAATCAAGTCAGCAATGAAAAGGGGCAAGAAAGGTTTCATAGGTTTCCACAATGATGAACCACTAGAACAAACCGGCAACAAAATATTTGAAGAGCTGTCACGAGTTAAACTACAGGAGCTGCTACTGTTTGATTTCGAAAAGCTTGCAACAGCCACAAACAACTTCCACCAGTCCAACAAACTTGGGCAGGGTGGTTTTGGTCCAGTGTACAAGGGGAAACTGCAAGATGGACAAGAAATAGCAGTTAAAAGACTTTCTAGAGCCTCTGGACAAGGTCTAGAAGAATTCATGAACGAAGTAGTTGTGATTTCCAAGCTTCAGCACCGCAATCTTGTAAGACTTCTTGGCTGCTGTATTGAAGGTGACGAAAAGATGCTACTATATGAATACATGCCAAACAAAAGTCTGGATGCTTTTATTTTTGATACAACAAAACATAAACTCCTAGATTGGAGGAAGCGCTGCTCTATAATAGAAGGAATAGGCCGAGGGTTGCTTTATCTTCACCGAGACTCTCGACTAAAAATTATACACAGAGATCTGAAGGCAAGTAATATCTTGTTAGATGATGAACTTAATCCAAAAATATCAGACTTTGGTATGGCTAGAATCTTTGGAGGAACAGAAGATCACGCCAATACTAACAGGATTGTTGGAACATATGGCTACTTGTCTCCTGAATATGCAATGCAAGGTCTGTTTTCAGAGAAATCAGATGTCTTTAGCTTTGGCGTTTTGCTGCTAGAGATTGTTAGTGGAAGAAGAAACTCTAGCTTTTATGATGACCAATCTCTTACCCTTTTAGGATTTGCCTGGATACAGTGGAAGGAAGGCAACGTAGTATCTTTAATAGATTCAGAAATATATGATCCTAATCATGATGAAGAAATTTTAAGGCTCATTCACATAGGACTTTTATGTGTACAAGAACTTGCTTCAGACAGACCCACAATGGCTATAGTAATTTCTATGCTTAATAGTGACGTTGCCTTGCTTCCTCCTCCAAGTCAACCTGCATTCGTCCGGGTGCAAAATGTGATCAATTCGGAGTCATCTCAGGAAAGTCAAAGAGTTTGTTCTGTGAATGTTATTAGTATTACAGAAATTCGTGGTAGATAG 2532 0.4119 MGFSSRTNLFFLLFMLWFYVFDVGIATDTITSSQSIKEPETLRSKDGNFTLGFFTPPNSTNHYVGIWWKTQSTVVWVANRNQPMNDSSGVVTISEDGNLEVLNGQDHVIWSTSVSSTSSNTSAQLSDVGKLELTETTTGNSLWDSFQQPSNTLLPQMKISSNRTGRGVQLTSWKNPSNPSVGNFSVGVVQREKIVEVFIWNETRPYWRSGPWSGGVFTGVEHMASAYLNYFSVVDGDVHYNPESGSEFMIYMLNSQGQLEENRWDDETKELQVSWTSIQSGCDVYGVCGSFAICDAQNQGTNGSPICSCLKGFEPMNKEEWDAQNWTSGCFRSITLQCERAKEQNTSMDTNEDKFLELQMVKVPDFPEESSVDPDTCRSKCLENCSCVAYSHDDGIGCMSWTGNLLDIQQLSSRGLHLYVRVDSSELQHDEGRKTTIIITISVIIGTLIIVTCACVMWRRTSCHPAKIWYSIKSAMKRGKKGFIGFHNDEPLEQTGNKIFEELSRVKLQELLLFDFEKLATATNNFHQSNKLGQGGFGPVYKGKLQDGQEIAVKRLSRASGQGLEEFMNEVVVISKLQHRNLVRLLGCCIEGDEKMLLYEYMPNKSLDAFIFDTTKHKLLDWRKRCSIIEGIGRGLLYLHRDSRLKIIHRDLKASNILLDDELNPKISDFGMARIFGGTEDHANTNRIVGTYGYLSPEYAMQGLFSEKSDVFSFGVLLLEIVSGRRNSSFYDDQSLTLLGFAWIQWKEGNVVSLIDSEIYDPNHDEEILRLIHIGLLCVQELASDRPTMAIVISMLNSDVALLPPPSQPAFVRVQNVINSESSQESQRVCSVNVISITEIRGR* 844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g02056 843 PIRSF SRK 2 843 IPR024171 GO:0004674
Lapu1g02056 843 Pfam Protein tyrosine and serine/threonine kinase 527 795 IPR001245 GO:0004672|GO:0006468
Lapu1g02056 843 ProSiteProfiles PAN/Apple domain profile. 338 423 IPR003609 -
Lapu1g02056 843 SUPERFAMILY Protein kinase-like (PK-like) 509 796 IPR011009 -
Lapu1g02056 843 SMART serkin_6 526 789 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu1g02056 843 Pfam D-mannose binding lectin 73 174 IPR001480 -
Lapu1g02056 843 ProSiteProfiles Protein kinase domain profile. 526 811 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu1g02056 843 Pfam PAN-like domain 350 408 IPR003609 -
Lapu1g02056 843 Gene3D Phosphorylase Kinase; domain 1 492 601 - -
Lapu1g02056 843 SMART ntp_6 350 422 IPR003609 -
Lapu1g02056 843 SMART blect_4 27 149 IPR001480 -
Lapu1g02056 843 CDD STKc_IRAK 532 797 - -
Lapu1g02056 843 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 13 787 - -
Lapu1g02056 843 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 23 146 - -
Lapu1g02056 843 Gene3D - 22 147 IPR036426 -
Lapu1g02056 843 CDD PAN_AP_plant 335 422 - -
Lapu1g02056 843 Pfam S-locus glycoprotein domain 207 316 IPR000858 GO:0048544
Lapu1g02056 843 CDD B_lectin 33 149 IPR001480 -
Lapu1g02056 843 Gene3D Transferase(Phosphotransferase) domain 1 602 801 - -
Lapu1g02056 843 FunFam receptor-like serine/threonine-protein kinase SD1-8 498 601 - -
Lapu1g02056 843 SUPERFAMILY alpha-D-mannose-specific plant lectins 72 212 IPR036426 -
Lapu1g02056 843 Pfam Domain of unknown function (DUF3403) 801 843 IPR021820 GO:0004674
Lapu1g02056 843 ProSiteProfiles Bulb-type lectin domain profile. 27 146 IPR001480 -
Lapu1g02056 843 ProSitePatterns Serine/Threonine protein kinases active-site signature. 647 659 IPR008271 GO:0004672|GO:0006468
Lapu1g02056 843 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 602 804 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g02056 Lapu-Chr1 34505698 34509292 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g02056 512 843 Receptor kinase-like Gene Family AT4G11530 55.752 3.14e-121 380
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lapu1g02056 PK_Tyr_Ser-Thr 6.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g02056 - - gmx:100779455 1231.85