Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g02055 ATGTTTCCAGAGTATGCAATGCAAGGATTGTTCTCTGAAAAATCAGATGTCTTTAGTTTTGGGGTTTTGCTACTTGAGATTATTAGTGGAAGACGAAATTCAAGCTTTTATGATGAAGAAAACTCTCTTACCCTTTCAGGATTTGCATGGATACAATGGAAAGAAGACAACATTCCATCTCTAATAGATCCAGGAATATATGATCCTAACCTTCGTAAATATATTCATAGGCACATACACATAGGACTTTTATGTGTACAAGAATTTGCAGCAGATAGGCCTACTATGGCCACTATAATTTCTATGCTAAACAGTGAGATTTTGGATCTTCCTCCTCCAATGAAACCTGCATTCATCCTGAGGAAAATTATGTTAAGTTCACTTTCCTCTGTAAGAGGAAATGACTTGAACTCCCTCAACACTGTCACTGTTTCGGACATCCAAGGCAGATAG 453 0.3731 MFPEYAMQGLFSEKSDVFSFGVLLLEIISGRRNSSFYDEENSLTLSGFAWIQWKEDNIPSLIDPGIYDPNLRKYIHRHIHIGLLCVQEFAADRPTMATIISMLNSEILDLPPPMKPAFILRKIMLSSLSSVRGNDLNSLNTVTVSDIQGR* 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g02055 150 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 1 129 - -
Lapu1g02055 150 Pfam Protein tyrosine and serine/threonine kinase 1 103 IPR001245 GO:0004672|GO:0006468
Lapu1g02055 150 SUPERFAMILY Protein kinase-like (PK-like) 3 132 IPR011009 -
Lapu1g02055 150 Gene3D Transferase(Phosphotransferase) domain 1 1 109 - -
Lapu1g02055 150 Pfam Domain of unknown function (DUF3403) 105 150 IPR021820 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g02055 Lapu-Chr1 34493519 34499050 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g02055 1 150 Receptor kinase-like Gene Family AT4G21410 50.649 1.67e-38 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lapu1g02055 PK_Tyr_Ser-Thr 9.2e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g02055 - - tpra:123892371 229.565