Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g02053 ATGGCAAAAATATTTGGAGGAACTGAAGATCAGGCCAATACTAACAGAGTTGTTGGAACATATGGTTATATGTCTCCTGAATATGCAATGCAAGGATTATTTTCAGTGAAATCAGATGTTTTTAGTTTTGGTGTTTTGGTACTAGAGATTGTTAGTGGAAGAAGAAATTCAAGCTTTTATGATGACGAGCATGTTCTTAGCCTCTTAGGATTTGCCTGGATACAATGGAAGGAAGGTAATATATCTTCTTTAATAGATCCTGAAGTATATGATCCTAGTCATCATAAAGATATTTTAAGGTGCATTCACATTGGACTTTTATGTGTTCAAGAACTTGCTATAGACCGACCCACTATGGCTGCAGTAATTTCTATGCTTAACAGTGAGGTTGCGTTTCTTCCTCCTCCAAGTCAACCTGCATTCATTCTGAGGCATAATATGCTGAATTTGGTGTCATCTAAAGGAAGTCATAGATTTTCCTCTACCAATGCTGTTAGCATTACTACTATCAGTGGAAGATAG 522 0.3659 MAKIFGGTEDQANTNRVVGTYGYMSPEYAMQGLFSVKSDVFSFGVLVLEIVSGRRNSSFYDDEHVLSLLGFAWIQWKEGNISSLIDPEVYDPSHHKDILRCIHIGLLCVQELAIDRPTMAAVISMLNSEVAFLPPPSQPAFILRHNMLNLVSSKGSHRFSSTNAVSITTISGR* 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g02053 173 Pfam Protein tyrosine and serine/threonine kinase 18 73 IPR001245 GO:0004672|GO:0006468
Lapu1g02053 173 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 1 154 - -
Lapu1g02053 173 SUPERFAMILY Protein kinase-like (PK-like) 5 162 IPR011009 -
Lapu1g02053 173 Gene3D Transferase(Phosphotransferase) domain 1 1 132 - -
Lapu1g02053 173 ProSiteProfiles Protein kinase domain profile. 1 133 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu1g02053 173 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 5 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g02053 Lapu-Chr1 34480719 34499050 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g02053 1 171 Receptor kinase-like Gene Family AT4G23150 47.368 2.74e-52 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lapu1g02053 PK_Tyr_Ser-Thr 2.3e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g02053 - - var:108327403 317.39