Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g02033 ATGGCTTTGTCAACCACACTCTTTCTTCTAACATGGTTATTGTCTTTTCAACTTTCACGTTCTTCATCAGCATCATCATCGTTGAGAATGGGCTCTTCCCTCTCTGTGGAAAATCCACAACATGTTCTCATCTCACCAAATGCTATCTTCTCTGCTGGATTTTTAGCCATAGGTGAGAACGCATATTCCTTTGCAATATGGTTCTCTGAGCCTCATTTTCACAGCCCTAACACTGTCGCATGGATGGCAAACCGTGACCAACCTGTGAATGGAAAACGCTCCAAACTTTCCCTCACACGCCATGGCAACATTGTCTTAGTTGACGCAGGTTTTAACACTGTTTGGTCTTCTAACACCGATTCATTAGACCCAGTAGAGTTGCACCTCAAAGATGATGGCAATCTTGTGCTACGCAAGCTACAAGGAACGGTTTTGTGGCAAAGTTTCGATTTTCCAACCGACACTCTCGTTCCTGGTCAACCTCTAACCAGATACGCACAACTTGTTTCTTCAAGAAGTCACACTAACCATTCATCTGGTTTCTACAAGTTGTTTTTCCGAGATGATAATATTCTTGGTCTTGTATATAATGGTCCTGATGTTTCCAGCAATTACTGGCCAAGTCCCTGGCGAGTAAGTTGGGATGTTGGTAGAACTTTATTCAATAGCAGTAGAATTGCTGTGTTGAATTCTTTTGGGGTCTTCCATTCATCGGATAACTTCACTACTGTGACATCAGATTATGGCACCGTTCTTCAGAGAAGGTTGAAATTGGATTCTGATGGTAATGTCCGAGTGTATAGTCGAAAGAGTGTGTTAGAGAAATGGTATGTTTCGTGGCACGCAATTAATAACGGTTGTGTGGTTCATGGGGTTTGTGGAGCCAACAGCACGTGTGGTTATGATCACAAGAGTGGGAAAAAATGTAAGTGTCTTCCAGGTTACAGATGGAACAACCACAGTGATTGGTCTTATGGGTGTAAACCCATGTTTGATCTCACCTGCAGTTGGAATGAGTCTACCTTCGTGGAGATGCGGGGTGTTGAATTTTACGGGTATGATAATTATTATATAGAAGTTAGTAACATTACTGCTTGTGAGAATTTGTGCTTGCAAAATTGCACTTGTCAGGGGTTTCAGCACTCCTATACCGATAGAAAGGGTTTTATCTTCAAGTGTTATACCAAAACACAATTGCTCAATGGACGACGTTCACCGAGATTCCAAGGAGTAACATACTTGAGAGTGTCCAAAAATTATAGCTTCTCTGACGAAGAATCTGCTACTGACACTACACATGATCATCGCGTTTGTTCAGTTCAACTTCAGAGAGCTTATATTAAAATACATGCAAGCCGTATTGTGAGTGTTTTTATGTGGTTTGCTACCGCACTTGGAGCTTTTGAAATGGTTTGCATATTTTTTATTTGGTGCTGTATTAGGACCAGCCAAAAGTCTAATGCAGATCAACAGGACTACCATCTTACAGCAACAGGATTCAGAAAATTTAGCTACTCCGAGCTGAAAAAGGCTACAAAGGGGTTTAGTCAAGAGATTGGAAGAGGTGGGGGAGGGGTTGTGTACGAAGGTATTTTATCAGATCAAAGACATGCAGCAATAAAGAGACTTTATAATGCTAAACAAGGAGAAGGGGAGTTTCTTGCTGAAGTAGGCATCATTGGAAGGCTTAACCACATGAACTTGATTGAAATGTGGGGATATTGTGCTGAGGGAAAACATAGGTTGTTGGTGTATGAGTATATGGAGAAAGGTTCTTTGGCAGAAAATCTCTCATCCAACACTCTTGATTGGAGGAAGAGATATAACATTGCAATTGGAACGGCAAGAGTTCTAGCATATCTGCATGAAGAATGTTTGGAGTGGATTTTGCACTGTGATATAAAGCCACAAAACATACTTCTAGATTCCAACTATGAGCCAAAGTTAGCAGACTTTGGCTTGTCCAAGCTCCTTAACAGAAATAACCCCAACAATCCAAGTATCTCTATGATAAGAGGGACCAGAGGCTATATGGCACCTGAGTGGGTTTTAAATTTGCCAATCACATCCAAAGTGGATGTTTATAGCTATGGAATTGTTGTTTTGGAAATGGTAACTGGGAGAAGCACAACAAGAAATGTCCAAGAAATGAATGGTGAAGAGACATATGATGGGAGGCTAGTGGCATGGGTGAGAGAAAAAAGAAGCAACACCAACTCATCTTGGGTGGAAGAAATAATTGAACCTGCTATTAGACCTGATTATGATGTGGGTCTCCTGAGACCTGATACCACTTTACCTGATACCACTTTACCTGATACCACTTTACCTGATACCACTTTACCTGATACCACTTGTTGGAGATTCTGGGGAGGAGAATGA 2382 0.4131 MALSTTLFLLTWLLSFQLSRSSSASSSLRMGSSLSVENPQHVLISPNAIFSAGFLAIGENAYSFAIWFSEPHFHSPNTVAWMANRDQPVNGKRSKLSLTRHGNIVLVDAGFNTVWSSNTDSLDPVELHLKDDGNLVLRKLQGTVLWQSFDFPTDTLVPGQPLTRYAQLVSSRSHTNHSSGFYKLFFRDDNILGLVYNGPDVSSNYWPSPWRVSWDVGRTLFNSSRIAVLNSFGVFHSSDNFTTVTSDYGTVLQRRLKLDSDGNVRVYSRKSVLEKWYVSWHAINNGCVVHGVCGANSTCGYDHKSGKKCKCLPGYRWNNHSDWSYGCKPMFDLTCSWNESTFVEMRGVEFYGYDNYYIEVSNITACENLCLQNCTCQGFQHSYTDRKGFIFKCYTKTQLLNGRRSPRFQGVTYLRVSKNYSFSDEESATDTTHDHRVCSVQLQRAYIKIHASRIVSVFMWFATALGAFEMVCIFFIWCCIRTSQKSNADQQDYHLTATGFRKFSYSELKKATKGFSQEIGRGGGGVVYEGILSDQRHAAIKRLYNAKQGEGEFLAEVGIIGRLNHMNLIEMWGYCAEGKHRLLVYEYMEKGSLAENLSSNTLDWRKRYNIAIGTARVLAYLHEECLEWILHCDIKPQNILLDSNYEPKLADFGLSKLLNRNNPNNPSISMIRGTRGYMAPEWVLNLPITSKVDVYSYGIVVLEMVTGRSTTRNVQEMNGEETYDGRLVAWVREKRSNTNSSWVEEIIEPAIRPDYDVGLLRPDTTLPDTTLPDTTLPDTTLPDTTCWRFWGGE* 794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g02033 793 Pfam Protein kinase domain 516 725 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu1g02033 793 SUPERFAMILY Protein kinase-like (PK-like) 489 719 IPR011009 -
Lapu1g02033 793 ProSiteProfiles Bulb-type lectin domain profile. 19 150 IPR001480 -
Lapu1g02033 793 SMART blect_4 33 152 IPR001480 -
Lapu1g02033 793 PIRSF SRK 1 757 IPR024171 GO:0004674
Lapu1g02033 793 Pfam PAN-like domain 335 398 IPR003609 -
Lapu1g02033 793 SUPERFAMILY alpha-D-mannose-specific plant lectins 79 169 IPR036426 -
Lapu1g02033 793 ProSiteProfiles Protein kinase domain profile. 513 793 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu1g02033 793 ProSiteProfiles PAN/Apple domain profile. 335 418 IPR003609 -
Lapu1g02033 793 FunFam Putative receptor protein kinase ZmPK1 22 151 - -
Lapu1g02033 793 ProSitePatterns Protein kinases ATP-binding region signature. 519 541 IPR017441 GO:0005524
Lapu1g02033 793 Gene3D Transferase(Phosphotransferase) domain 1 588 765 - -
Lapu1g02033 793 CDD PAN_AP_plant 331 417 - -
Lapu1g02033 793 ProSitePatterns Serine/Threonine protein kinases active-site signature. 629 641 IPR008271 GO:0004672|GO:0006468
Lapu1g02033 793 CDD B_lectin 43 152 IPR001480 -
Lapu1g02033 793 FunFam S-receptor-like serine/threonine-protein kinase 482 587 - -
Lapu1g02033 793 SMART serkin_6 513 747 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu1g02033 793 Pfam D-mannose binding lectin 78 164 IPR001480 -
Lapu1g02033 793 FunFam Putative receptor-like protein kinase 588 761 - -
Lapu1g02033 793 Gene3D Phosphorylase Kinase; domain 1 478 587 - -
Lapu1g02033 793 PANTHER OS07G0415500 PROTEIN 6 735 - -
Lapu1g02033 793 Pfam S-locus glycoprotein domain 248 316 IPR000858 GO:0048544
Lapu1g02033 793 Gene3D - 19 150 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g02033 Lapu-Chr1 34154184 34161771 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g02033 470 789 Receptor kinase-like Gene Family AT1G56120 37.822 2.40e-55 203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Lapu1g02033 Pkinase 1.9e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g02033 - - gmx:100783758 1271.53