Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g02029 ATGGGCTCATCCCTCTCCGTAGACAAACCACAAGACGTTATTCTCTCCCCAAACGCCGTTTTCTCCGCTGGCTTCGTTGCCGTCGGTCAAAACGCCTACTCCTTCGCCATATGCTTCACACACACTCCTCCCCACCAACAACCCACAATCGTGTGGATGGCCAACCGCGAATACCCCGTTAACGGAAAACGCTCCAAGCTCACCCTCTCACACACCGGTAACCTACTCTTGGATGACGCTGCTCAACGAACGGTGTGGTCTTCAAACACTGCTTCATTGGCTTCACCACTGCTGCATCTCAAAGATGATGGCAATCTCGTGTTGACTGACATTCATGGAACCGTTCTGTGGCAAAGCTTTGATTTCCCAACTGACACTCTCCTTCCCGGACAACCCCTCACGAGACACGCTCAACTCGTGTCTGCCAGAAGCGACACTAACCATTCCTCCGGTTTCTACAAGCTCTTCTTTGACGACGACAACGTTCTTCGTCTTCTCTACGATGGTCCTGATGTTTCTAGCATTTACTGGCCATATCCATGGTTGGTGAGTTGGGACGCTGGAAGGTCTACTTACAACAGCAGTAGATTCGCAGCGTTGGACTCACTCGGAAGATTCGTTTCCTCTGATGCTTATACTTTCACCACATCTGATTATGGTGCTATGAAGCAGAGAAGATTAAAACTTGATTCTGATGGTAACCTTAGAGTCTATACACTGCATCATGAATGGTTTGTTTCCTGGCAAGTTATATCTGACCCGTGCACTATACACGGCGTTTGTGGAGCTAACTGTGCGTGCAGTTATGATCCCAGACATGGAAGGAAGTGCTCGTGTCTTCCGGGACACAGAGTGAAGAACCATAGCGATTGGTCCTATGGCTGTGAACCTATGTTTGTTTTTTCTTGCAATAGAAGTGAGTCTATCTTCTTGGAGTTGCTGGGTGTTGAGATTTATGGTTATGATGCTAACTTTTCTGAAGCTAATAGCTATACCTATTGTAAGAATCTGTGCTTAGAAGACTGTAACTGTAAGGGGTTCCAGTACTCATACAATGATGGCAAAAACGATTACAAGTGCTACACCAAGATGCAATTGCTTAATGGGCGGCGTAGACCGAATTTCAAAGGAGCAATGTACGTGAAAGTGCCTAAAAATCATAGCCTTTTCAGGGAAGAATCTTTTGATTCAAATGAGAATGTTTGTGGTGTTGAAATTCCCAGAGTGTATGACAGATATCATGTAAGCAAGATTGTTAGGTTTTTTCTTTGGGTTGCCGTTGCCATTGGGGCTTTTGAATCGGTTTGTGTTTTTGTGGTGTGGGTCTTCATAGTCAAGACTCGTCAGAAGTCTAGAGCAGGTCAACACGAGTACCATCCTGTGACCGATAGATTCAGAAAATACAGTTATTCTGAGTTGAAGGAGGCGACGAAGGGGTTCAGCCAGGAGATTGGAAGGGGTGCAGGAGGGGTTGTGTACAAAGGTATTTTATCAGATCAAAGACATGCAGCAATTAAGAGACTGAACGAAGCTAAACAAGGAGAAGGAGAGTTCCTTGCTGAAGTGAGCATCATTGGAAGGCTTAACCACATGAACTTGATTGAAATGTGGGGATACTGTGCTGAGGGAAAACATAGGTTGTTGGTGTATGAGTATATGGAGAATGGTTCTTTGGCAGAAAATCTCTCATCCAACACTCTTGATGGGAGCAAGAGATACAAGATTGCCCTTGGAACAGCAAGAGTTCTAGCATATCTTCATGAAGAATGCTTAGAATGGATATTGCACTGTGATATAAAGCCCCAAAACATACTTCTTGATGCTACTTGTGAGCCCAAGGTAGCAGATTTTGGGCTGTCGAAGCTACAAAACAGGAACAACCTGAACAATTCAAGTTTTTCAATGATAAGAGGAACAAGAGGATATATGGCACCTGAGTGGGTTCTGAACTTGGCAATTACCTCCAAGGTTGATGTTTACAGCTATGGAATTGTTCTGCTGGAGATGATAACTGGGAAGAGCCCAACAATTGGTGTCCATAACATTGATGGAGAAGACTCGTACAATGGAAGGCTGGTAGCATGGGTGAGAGAGAAAAGGAGTGGAACATCTTGGCTAGAGCATATCATTGATCCTGCAATGGAAACAAATTATGATGAATCTGAGATGGAGCTTTTAGCCAAAGTGGCTTTGGACTGTGTTGAGGAAGACAAAGATATAAGGCCAACCATGAGCCAAGTGGTGGAGATGCTTCAAAGTGTTCCT 2265 0.4472 MGSSLSVDKPQDVILSPNAVFSAGFVAVGQNAYSFAICFTHTPPHQQPTIVWMANREYPVNGKRSKLTLSHTGNLLLDDAAQRTVWSSNTASLASPLLHLKDDGNLVLTDIHGTVLWQSFDFPTDTLLPGQPLTRHAQLVSARSDTNHSSGFYKLFFDDDNVLRLLYDGPDVSSIYWPYPWLVSWDAGRSTYNSSRFAALDSLGRFVSSDAYTFTTSDYGAMKQRRLKLDSDGNLRVYTLHHEWFVSWQVISDPCTIHGVCGANCACSYDPRHGRKCSCLPGHRVKNHSDWSYGCEPMFVFSCNRSESIFLELLGVEIYGYDANFSEANSYTYCKNLCLEDCNCKGFQYSYNDGKNDYKCYTKMQLLNGRRRPNFKGAMYVKVPKNHSLFREESFDSNENVCGVEIPRVYDRYHVSKIVRFFLWVAVAIGAFESVCVFVVWVFIVKTRQKSRAGQHEYHPVTDRFRKYSYSELKEATKGFSQEIGRGAGGVVYKGILSDQRHAAIKRLNEAKQGEGEFLAEVSIIGRLNHMNLIEMWGYCAEGKHRLLVYEYMENGSLAENLSSNTLDGSKRYKIALGTARVLAYLHEECLEWILHCDIKPQNILLDATCEPKVADFGLSKLQNRNNLNNSSFSMIRGTRGYMAPEWVLNLAITSKVDVYSYGIVLLEMITGKSPTIGVHNIDGEDSYNGRLVAWVREKRSGTSWLEHIIDPAMETNYDESEMELLAKVALDCVEEDKDIRPTMSQVVEMLQSVP 755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g02029 755 SUPERFAMILY Protein kinase-like (PK-like) 456 751 IPR011009 -
Lapu1g02029 755 ProSitePatterns Serine/Threonine protein kinases active-site signature. 594 606 IPR008271 GO:0004672|GO:0006468
Lapu1g02029 755 Pfam Protein kinase domain 481 749 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu1g02029 755 Pfam PAN-like domain 303 365 IPR003609 -
Lapu1g02029 755 Gene3D Hepatocyte Growth Factor 312 388 - -
Lapu1g02029 755 Gene3D - 122 247 IPR036426 -
Lapu1g02029 755 FunFam S-receptor-like serine/threonine-protein kinase 447 552 - -
Lapu1g02029 755 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 553 755 - -
Lapu1g02029 755 SMART serkin_6 478 751 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu1g02029 755 Gene3D Phosphorylase Kinase; domain 1 442 552 - -
Lapu1g02029 755 CDD B_lectin 14 123 IPR001480 -
Lapu1g02029 755 PANTHER OS07G0415500 PROTEIN 2 753 - -
Lapu1g02029 755 Pfam D-mannose binding lectin 49 136 IPR001480 -
Lapu1g02029 755 CDD STKc_IRAK 484 752 - -
Lapu1g02029 755 ProSiteProfiles PAN/Apple domain profile. 303 384 IPR003609 -
Lapu1g02029 755 Gene3D Transferase(Phosphotransferase) domain 1 553 755 - -
Lapu1g02029 755 Pfam S-locus glycoprotein domain 211 286 IPR000858 GO:0048544
Lapu1g02029 755 Gene3D - 3 121 IPR036426 -
Lapu1g02029 755 SMART blect_4 5 123 IPR001480 -
Lapu1g02029 755 ProSiteProfiles Protein kinase domain profile. 478 755 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu1g02029 755 CDD PAN_AP_plant 302 384 - -
Lapu1g02029 755 PIRSF SRK 1 755 IPR024171 GO:0004674
Lapu1g02029 755 ProSiteProfiles Bulb-type lectin domain profile. 1 121 IPR001480 -
Lapu1g02029 755 ProSitePatterns Protein kinases ATP-binding region signature. 484 506 IPR017441 GO:0005524
Lapu1g02029 755 SUPERFAMILY alpha-D-mannose-specific plant lectins 49 179 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g02029 Lapu-Chr1 34122122 34124473 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g02029 468 754 Trihelix Transcription Factor Family AT5G38560 41.554 1.06e-62 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Lapu1g02029 Pkinase 2.5e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g02029 - - gmx:100784287 1117.45