Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01989 ATGTCCCCAGCAGGTTCTTCAAGATGGAGCCCTACCACAGAACAACTCATGATCTTAGAGGAACTGTACAGGAGTGGCATTAGAACTCCTAGTGCCTCTCAAATTCAGCAAATAACCACACACCTTTCTTTCTATGGCAGGATAGAAGGAAAGAATGTGTTCTACTGGTTTCAGAACCACAAGGCTAGGGATAGACAGAAGCTCAGAAGGAAACTCAGCAAGCAACTGCAGCTACAGCAACAACAACTCCAAGTCCATCATTGCCAACTCAATCCAGATATCACTAACCACTATGTTGGCACCTATGGTTATACTCCTTGTTCTTCAACCCAGGATTTTCCCTTTTATAACCCACCCACCTTGCTTTTTCAGGGAGGAACTGCAAGCACATCTGAACAGGCATTGAATTGCGCATGGAATATGCACAACCTGCAAAGTAATTTGGTGGAGAAGGAAGAGGTGACTTTCTACAACAACAACAACGGTTGGAGTACATTTGCCGATGTTAACAACCAAGCATCTTCATGTTGCACTTCTCCACCTCTCAAGACCCTTGATCTCTTTCCACTCACAACCACCAAAACCAATGAAGAGAGCACCACTCCATCACCCAAGTAG 618 0.4482 MSPAGSSRWSPTTEQLMILEELYRSGIRTPSASQIQQITTHLSFYGRIEGKNVFYWFQNHKARDRQKLRRKLSKQLQLQQQQLQVHHCQLNPDITNHYVGTYGYTPCSSTQDFPFYNPPTLLFQGGTASTSEQALNCAWNMHNLQSNLVEKEEVTFYNNNNGWSTFADVNNQASSCCTSPPLKTLDLFPLTTTKTNEESTTPSPK* 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01989 205 FunFam WUSCHEL-related homeobox 4 6 73 - -
Lapu1g01989 205 CDD homeodomain 8 67 IPR001356 GO:0003677
Lapu1g01989 205 ProSiteProfiles 'Homeobox' domain profile. 2 67 IPR001356 GO:0003677
Lapu1g01989 205 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 2 199 IPR044555 GO:0003700|GO:0099402
Lapu1g01989 205 Gene3D - 3 67 - -
Lapu1g01989 205 Pfam Homeodomain 7 66 IPR001356 GO:0003677
Lapu1g01989 205 SUPERFAMILY Homeodomain-like 7 66 IPR009057 -
Lapu1g01989 205 SMART HOX_1 4 71 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g01989 Lapu-Chr1 33483418 33484492 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g01989 1 200 Wox Gene Family AT2G28610 39.919 7.03e-43 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Lapu1g01989 Homeodomain 6.6e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01989 - - gmx:102663963 272.322